Marinobacterium rhizophilum: KDW95_23025
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Entry
KDW95_23025 CDS
T08609
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
mrz
Marinobacterium rhizophilum
Brite
KEGG Orthology (KO) [BR:
mrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mrz03009
]
KDW95_23025
Enzymes [BR:
mrz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
KDW95_23025
Ribosome biogenesis [BR:
mrz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
KDW95_23025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF5818
Motif
Other DBs
NCBI-ProteinID:
UTW12060
LinkDB
All DBs
Position
complement(5127923..5128642)
Genome browser
AA seq
239 aa
AA seq
DB search
MRLDKFVCKSTELSRCEAARAISRGELSVNGAVVTHAATQVHENNTVMFRGQRLTARPFR
YILLHKPAATLCSNVDEAYPSIFNHIDVQNPGELHIAGRLDADSTGLVLVTDDGRWSFEI
IRPDKACSKRYRVGLSYPLADDVAQKFADGLQLQGEQKLTRPATLEVVSPKEVLLTITEG
RFHQVKRMFAAVGNRVLSLHRERIGSVQLDVDVGQWRYLTRDEVLSFTEPNRQPAAVAI
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctggacaaatttgtttgcaaaagcaccgaactcagccgatgcgaggccgcccgc
gccatcagccgtggcgagctgagcgtaaatggtgcagtggtgactcatgcggccacccag
gtgcatgaaaacaataccgtcatgttcaggggccagcggctgacggcacggccctttcgc
tacatcctgctgcataagcccgccgcgaccctgtgctccaacgtcgacgaggcctatcca
tccatcttcaaccacatcgacgtgcagaaccccggcgagctgcatattgcaggccgcctg
gatgccgatagcacggggctggtactggtcaccgatgacggccgctggtcgttcgagatc
atccggccggacaaggcctgcagcaagcgctaccgcgtggggctgagctacccccttgcc
gatgatgttgcccagaagtttgccgatggtctgcagctgcagggcgaacagaagctgacc
cggcctgcgacactggaggtggtgagtccgaaggaagtgctgctgacgatcaccgagggc
aggtttcaccaggtgaagcgcatgtttgccgccgtgggcaaccgggtgctgtcactgcat
cgcgagcgcattggtagtgttcagctggatgtggacgtcggccagtggcgctacctgact
cgggacgaggtgttgtcgtttacagagccgaacagacaacccgctgccgtagcgatatag
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