Mycobacterium sp. JS623: Mycsm_00007
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Entry
Mycsm_00007 CDS
T02423
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
msa
Mycobacterium sp. JS623
Brite
KEGG Orthology (KO) [BR:
msa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msa03032
]
Mycsm_00007
03400 DNA repair and recombination proteins [BR:
msa03400
]
Mycsm_00007
Enzymes [BR:
msa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Mycsm_00007
DNA replication proteins [BR:
msa03032
]
Prokaryotic type
DNA Topoisomerases
Mycsm_00007
DNA repair and recombination proteins [BR:
msa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mycsm_00007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LAGLIDADG_3
Intein_splicing
Hint
TPD52
Motif
Other DBs
NCBI-ProteinID:
AGB20475
UniProt:
L0ILU3
LinkDB
All DBs
Position
8753..12505
Genome browser
AA seq
1250 aa
AA seq
DB search
MTDTLPPEGDRIEPVDIQQEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAMYDSG
FRPDRSHAKSARSVAETMGNYHPHGDSSIYDTLVRMAQPWSLRYPLVDGQGNFGSPGNDP
PAAMRYCVTGDALVRLPFGQSVRIADIVPGARPNSDNVIDAKVLDRHGNPVVADRLFHSG
EHQTYTVTTAEGYSVTGTANHPLLCLVDVAGVPTLLWRLIEEVRPDDRVVIQRTPATEFG
PGDFYDTLEALLLGAFISEGFVSQRRAGFNNVDRDYFNMVVAAYDAVVGGPRYVSERTIA
SGSNLLELDIQNLTTLRRSRLAELMGRRSADKAVPQWLWHSPAAVKRAFLGALFEGDGSC
SALPRNTIQISYTTRSGHLAKDVQQMLLEFGVVARRYLHATGEHKVVITNRAHAELFATR
VGFGGVKQSKLQGLVASWPRKAGGLDTDYVPGLATFVRAHGGGRWVDKEWLRKHNIDRLS
RWQRDGAEILSHISDPDVRAIASELTDGRFYYARVASVTDAGVQPVYSLRVDTDDHAFIT
NGFISHNTEARLTPLAMEMLREIDEETVDFIPNYDGRVQEPTVLPSRFPNLLANGSGGIA
VGMATNMPPHNLRELADAVYWCLENHEADEEATLAAVTEYVKGPDFPTYGLIVGSQGIND
AYATGRGSIRMRGVCEIEEDNRGRTGIVITELPYQVNHDNFITSIAEQVRDGKLGGISNI
EDQSSDRVGLRIVVELKRDAVAKVVLNNLYKHTQLQTSFGANMLAIVDGVPRTLRLDQLI
RHYVNHQLDVIVRRTTYRLRKANERAHILRGLVKALDALDEVIALIRASETVDVARQGLI
ELLDIDDIQAQAILDMQLRRLAALERQKIVDDLAKIEAEIADLEDILAKPERQRAIVRDE
LKEIVDKYGDDRRTRIIAADGDVNDEDLIAREDVVVTITETGYAKRTKTDLYRSQKRGGK
GVQGAGLKQDDIVNHFFVCSTHDWILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAF
QPEERIAQVIQIKSYEDAPYLVLATKNGLVKKSKLTDFDSNRSGGIVAVNLRDGDELVGA
VLCSSDDDLLLVSAKGQSIRFSATDEALRPMGRATSGVQGMRFNEEDKLLSLNVVQEDTY
LLVATAGGYSKRTAIDEYPVQGRGGKGVLTIQFDKRRGSLVGALIVDDDTELYAITSGGG
VIRTAARQVRKAGRQTKGVRLMNLGEGDTLVAIARNAEETDVDAVETDAT
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgactgatactttgccgcccgagggcgaccggatcgagcctgtcgacatccagcaggag
atgcagcgcagctacatcgactatgcgatgagcgtcatcgttggccgcgcgctgccggag
gttcgcgatggcctcaagccggtgcaccgccgcgtgctctacgcgatgtacgactcgggt
ttccgaccggatcgcagccacgcgaaatcggcgcgctccgttgccgaaacgatgggtaac
tatcacccccacggtgactcgtcgatctacgacaccctggtgcgcatggcgcagccgtgg
tcgctgcgctacccgctcgtcgacgggcagggcaacttcggttcaccgggcaacgatcca
ccggccgccatgaggtattgcgtcaccggagacgcgctagtgcggttgccttttggccaa
tcggttcggatcgcggacatcgtgcccggtgctcggcccaattcggacaatgtcatcgat
gcgaaggttctggaccgacacggcaacccagtcgtggcggatcggctcttccattccggt
gagcaccagacctacacagtgactacggccgaagggtattcggttactggtaccgccaac
catccgcttctgtgtctggtggatgtagccggcgtgccgacgctgttgtggaggctaatc
gaagaagtacgcccggatgaccgtgtggtgatccaaagaacaccggcgacggagttcggc
cccggtgacttttacgacacgctggaggcgcttctacttggagctttcatcagtgaaggc
ttcgtctcacaacgccgcgccgggttcaacaacgtcgaccgtgattacttcaatatggtc
gtagccgcgtatgacgctgtcgtcggcggcccgagatacgtgtcggaacgcacgattgcg
tcgggatccaaccttctcgagctcgatatccaaaatctgaccacgttgcgcagaagtcgg
ctcgcagagctcatgggccggcgctcggcggacaaggctgtcccccaatggctgtggcac
tcccccgccgcagtgaagcgcgcgtttctaggtgctctgttcgaaggcgacggttcgtgc
tccgcactgccgcgcaacacgattcagatctcatacacgacgcgtagtggccatctcgca
aaagatgtccagcaaatgctgctggagttcggtgtggttgcgcggcggtacctgcacgcc
acaggcgagcacaaggtcgtcataaccaatcgcgcccatgccgagctatttgcaacacga
gttgggttcggtggcgtcaagcagtcgaagctgcaaggtctcgtagcgtcgtggccgcgc
aaggccggtggcttggataccgactacgtcccggggctcgcgacatttgtgcgggcgcac
ggtggcggtcgttgggtcgataaggaatggttgcgcaagcacaacatagaccggctgtcc
aggtggcagcgcgatggagctgagatcctcagccacatcagcgacccggacgtccgcgcc
atcgcgtcggagctgactgacggccggttctattacgcacgcgtcgcatcagtgaccgat
gcaggcgtgcagcctgtctacagccttcgcgtcgacacggacgatcacgcattcatcacc
aacggcttcatcagccacaacacggaagcgcggctgactccgcttgcgatggagatgctg
cgcgaaatcgacgaggagacagtcgatttcatcccgaactacgacgggcgcgtgcaggag
ccgacggttctgccgagccggttcccgaacctgctcgccaacgggtcgggcggtatcgcg
gtcggcatggccaccaacatgccgccgcacaacctgcgcgagttggccgacgccgtctac
tggtgtctggaaaaccacgaggccgacgaagaagcgacgctggccgcggtgaccgagtat
gtcaagggaccggactttcccacctacggcttgatcgttggctcgcagggcatcaacgac
gcgtatgccaccggccggggatcgattcggatgcgcggtgtgtgcgagatcgaagaggac
aaccgcgggcgcaccgggatcgtcatcaccgagcttccgtatcaggtgaaccacgacaac
ttcatcacctcgatcgccgagcaggtccgcgacggcaagctcggcgggatctcgaacatc
gaagaccagtccagcgaccgcgtcgggctgcgaatcgtggtggagctcaagcgcgatgct
gtcgcgaaggtggtgctgaacaacctctacaagcacacccagctgcagaccagcttcggc
gccaacatgctggcgatcgtcgacggtgtgccccgcacacttcggctcgaccagctgatc
cggcactacgtcaaccatcaactcgacgtcatcgtccggcgcaccacctaccggctgcgc
aaggccaacgagcgggcccacatcctgcgtggattggtcaaagccctcgacgcgctcgat
gaagtaatcgcgttgatccgggcgtcggagaccgtcgatgtcgcgcggcagggattgatc
gagctgctcgatatcgacgacatccaggcccaggccatcctggacatgcagttgcgccgg
ctggccgccctggaacgtcagaagatcgtcgacgacttggccaagatcgaggccgagatc
gccgacctggaagacatcctggccaagcccgagcggcagcgcgccatcgtgcgcgacgag
ctcaaggagatcgtcgacaagtacggcgacgaccgccgaacccgcatcatcgccgccgac
ggcgacgtcaacgacgaagatctgatcgcgcgtgaggacgtcgtcgtcaccatcaccgaa
accggctacgccaaacgcaccaagaccgacctgtaccgcagccaaaagcgaggcggcaag
ggcgtgcagggcgccgggctcaagcaggacgacatcgtcaaccacttctttgtgtgttcg
acgcacgactggatcctgttcttcaccacgcagggccgggtgtaccgcgccaaggcctac
gacctgcccgaggcgtcgcggaccgcgcgcggtcagcacgtcgcgaacctgctggccttc
cagccagaggagcgcatcgctcaggtcatccagatcaagagctacgaggatgcgccgtat
ctcgtgctggcgaccaagaacggcctggtgaagaagtcgaagctgaccgatttcgactcc
aaccgttcgggcggcatcgtggcggtgaacctgcgcgacggcgacgaactggtcggcgcc
gtcctgtgttcctccgacgacgatctgctgctcgtgtcggccaagggccagtcgattcga
ttctcagcaaccgatgaggcactgcgcccgatggggcgtgccacctccggtgtgcagggc
atgcggttcaacgaagaggacaagctgctgtcgttgaacgtggtccaagaggacacgtat
ttgctggtcgcgacggccggcggctactccaagcggaccgcgattgacgaatacccggtt
cagggccgcggcggcaaaggggtgctgacgatccagttcgacaagcgtcgtggcagtctg
gtcggagcgttgatcgtcgatgacgacaccgagttgtacgccatcacctccggtgggggc
gtcatccggacggcggctcgccaggtccgcaaggccgggcggcagaccaagggcgttcgg
ttgatgaacctgggcgagggcgacacactggttgctattgcgcgcaacgctgaagagacc
gacgttgacgcggtcgagaccgacgcaacgtaa
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