Mycobacterium sp. JS623: Mycsm_01320
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Entry
Mycsm_01320 CDS
T02423
Name
(GenBank) topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msa
Mycobacterium sp. JS623
Brite
KEGG Orthology (KO) [BR:
msa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msa03032
]
Mycsm_01320
03400 DNA repair and recombination proteins [BR:
msa03400
]
Mycsm_01320
Enzymes [BR:
msa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mycsm_01320
DNA replication proteins [BR:
msa03032
]
Prokaryotic type
DNA Topoisomerases
Mycsm_01320
DNA repair and recombination proteins [BR:
msa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mycsm_01320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AGB21735
UniProt:
L0IQD9
LinkDB
All DBs
Position
complement(1325141..1326157)
Genome browser
AA seq
338 aa
AA seq
DB search
MRLRRSAVRGPGIRRVGRGKGFSYEDQDGVPITDAATLQRIKDLVIPPAWKKVWICPYPN
GHIQAVGTDAAGRRQYLYHQQWQQERNEEKFDRVLEMSAALPEMRRRIAADLRGRGLGRD
RVLALALHLLDLGYFRAGGEQYAEEHNSYGIATLRCEHIELQKQAVEFDYPAKSGVRRTL
LIDDPEVIRSVRALMRDRPRSDRLLVCRNGSDHIDLHAEDLNARFKELVGDEYTVKDLRT
WHGTVLGAAAFVDADPPVNKTVIKRVESAVMKEVAEELGNTPAVARSSYVDPRVVDGYEA
GLTIAAGARRAERTREPAARQAVLESSTARLIRKVAKG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttcgccgtagcgcggtccgcggcccggggatacgccgggtgggccgcggcaag
ggcttctcctacgaagatcaggacggcgtaccaatcaccgacgcggccacgctgcagcgc
atcaaagacctcgtgatcccgcctgcgtggaagaaggtatggatctgcccctatccgaac
ggccacattcaggccgtcggaaccgacgccgccggccgacgccagtacctgtatcaccag
caatggcagcaggaacgcaacgaggaaaagttcgaccgggtactcgagatgtcggcggcg
ctgcccgagatgcgccgacgcatcgccgccgatctgcgcggccggggtctgggccgcgac
cgagtgctcgccctggcactgcacctcctcgatctcggttacttccgtgcaggcggcgaa
cagtacgcagaggaacacaactcgtatggcatcgccacgctgcgctgcgagcacatcgaa
ctgcagaagcaggccgtggagttcgactacccggccaaaagcggggtacgccggacgtta
ctcatcgacgaccccgaggtgatccgctcggtgcgggcattgatgcgggacaggcccagg
tccgaccgactactggtgtgccgcaacggttctgaccacatcgacctgcatgccgaagac
ctcaacgcacggttcaaggagctcgtcggagacgagtacacggtcaaggacctgcgcacc
tggcatggcacggtgctcggcgccgcggcgttcgtcgacgcggacccgccggtcaacaaa
accgtgatcaaacgggtcgaatccgccgtcatgaaagaggtcgccgaagagcttggcaac
acaccggcggtagcccggtcgtcctatgtcgacccccgggtggtcgacggatatgaggcc
ggcctcacgatcgcagcaggcgcgcgccgagccgagcgcacccgcgagcccgctgcgcga
caggccgtcctggagagcagcaccgcgcggctgatccgcaaggtggccaagggctag
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