Mycobacterium sp. JS623: Mycsm_01322
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Entry
Mycsm_01322 CDS
T02423
Name
(GenBank) RNA polymerase sigma-70 factor, sigma-B/F/G subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
msa
Mycobacterium sp. JS623
Brite
KEGG Orthology (KO) [BR:
msa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msa03021
]
Mycsm_01322
Transcription machinery [BR:
msa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mycsm_01322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_24
MarR_2
HTH_Crp_2
HTH_3
MarR
Sigma70_ECF
DUF7343
HTH_37
HTH_31
HTH_IclR
KORA
Motif
Other DBs
NCBI-ProteinID:
AGB21737
UniProt:
L0IUS3
LinkDB
All DBs
Position
1326833..1327621
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AA seq
262 aa
AA seq
DB search
MTPSSAQGSSSRSNSEYADVAAMFRELEVLPDSSAQFQRQRDRIVERCLPLADHIARRFD
GRGEPRDDLVQVARVGLVNAVIRFDVNAGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRR
LKELHLRLGAATAELSQRLGRAPTASELAAELDMDRDEVIEGLVAGSSYNTLSIDSGGSG
NEDAPAIADTLGDVDLGLDQIENREALRPLLAALPERERTVLLLRFFESLTQTQIAERVG
ISQMHVSRLLAKSLARLRDQLQ
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgaccccctcgtcggcccagggttcgtcctcacgatcgaactctgaatacgcggacgtc
gctgccatgttccgcgaactcgaagtactgcccgattcgtcggcgcagttccagcgccag
cgcgaccggatcgtcgagcgctgcctcccgctggccgatcacatcgctcgcagattcgac
ggccgcggcgaaccgcgcgacgatctcgtgcaggtggcacgcgtcggtctggtcaatgcg
gtgatccgattcgatgtcaacgccgggtcggacttcgtttcgttcgcggtgccgaccatc
atgggtgaggttcgcaggcactttcgcgacaacagttggtcggtcaaggtgccgcgtcgg
ctcaaggaacttcatctgaggctgggcgcggcgacggccgagctttcccagcggcttggc
cgcgcgccgacagcctcggaactggccgccgagctggacatggaccgtgacgaggtgatc
gagggcctggtcgcgggcagctcttacaacacgctatcgatcgacagcggcggcagtggt
aacgaagatgcacctgcgattgccgacacgctcggcgacgtcgatcttggtctggatcag
atcgagaaccgagaagcgttgcggcccttgctcgctgcgttgccggagcgggaacggacc
gtgctgctgttgcggttcttcgaatcgttgacgcagacgcagatcgccgagcgggtcggc
atctcgcagatgcacgtctcccgtttgttggcgaaatccctagcgcgacttagggaccag
ttgcagtaa
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