Mycobacterium sp. JS623: Mycsm_01450
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Entry
Mycsm_01450 CDS
T02423
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msa
Mycobacterium sp. JS623
Pathway
msa03420
Nucleotide excision repair
msa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mycsm_01450
03430 Mismatch repair
Mycsm_01450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msa03400
]
Mycsm_01450
Enzymes [BR:
msa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mycsm_01450
DNA repair and recombination proteins [BR:
msa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mycsm_01450
MMR (mismatch excision repair)
Other MMR factors
Mycsm_01450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_11
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AGB21861
UniProt:
L0IUL6
LinkDB
All DBs
Position
1449079..1451214
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AA seq
711 aa
AA seq
DB search
MSQPPAKMDRMSVEAPSSRDELLADLDDEQREAVLAPRGPVCVLAGAGTGKTRTITRRIA
HLVAAGHVAPQQVLAVTFTSRAAGEMRGRLRALDDGAGTGSVQAMTFHAAARRQLSYFWP
RVVGDTGWQLLDTKFSVVAQAANRAGMSTSTDDVRDLAGEIEWAKASLISPEGYGAAVAQ
VGRDIPFDAAKIAAVYAGYEKLKARHDGMALLDFDDLLLHTAAAIENDDAVAQEFRDRYR
CFVVDEYQDVTPLQQRVLDAWLGNRDDLTVVGDANQTIYSFTGATPRYLLDFSRRFPDAA
VVRLERDYRSTPQVVSLANRVIAAARGRMAGSKLHLVGQRDPGPNPTFNEHPDEVAEANA
VAKKIKNLIESGTAAAEIAVLYRINAQSEVYEEALTEAGVPFQVRGGEGFFSRQEIRQAL
LALQRAAERDVEGALPDIVRAVLEPLGLTAEPPAGTRARERWEALAGLAELVDEEVALRP
ALDLRSLLAELRQRADARHPPTVQGVTLASLHAAKGLEWDAVFLVGLADNTLPISHALAH
GPDSEPVEEERRLLYVGITRARTHLALSWALARAPGGRQSRRSSRFLNGIAPQSPSDATP
NRARRPRGATPRCRVCNGALTTPPAIMLRRCESCPSDIDEELLAQLKDWRLRTSKEMSVP
AYVVFTDNTLIAIAETLPTDDAGLVAIPGIGARKLEQYGPDVLAMVKGRSR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagccccctgccaagatggaccgcatgtcggtcgaggcacccagttcgcgtgac
gaactcctcgctgacctcgacgacgaacagcgcgaagcagtcctcgccccgcgcggtccg
gtctgcgtgctggccggtgcaggcaccggcaagacccgcaccatcacccgccgcatcgcc
cacctcgtggcggcgggacacgtcgcaccccagcaggtgttggcggtgacgttcacgtcg
cgcgctgcaggcgagatgcgcggccggttgcgtgccctcgacgacggtgcgggcacgggt
tcggtgcaggcaatgacgtttcacgccgccgcgcgccgccagctgtcgtacttctggccg
cgcgtcgtcggcgacaccgggtggcagctgctcgacacgaagttctcggtcgtcgcgcag
gctgccaaccgggcggggatgtcgaccagcaccgatgacgtgcgtgacctcgcgggcgaa
atcgaatgggccaaggcatctttgattagtcccgagggctatggcgccgccgttgcgcag
gtcggccgcgacattccgttcgatgccgcgaagatcgccgccgtctacgccggatacgaa
aagctcaaggcccgccacgacggcatggcgctgctggatttcgatgacctgctgctgcat
accgccgccgcgatcgaaaacgatgacgccgtcgcacaggaattccgcgaccgctaccgc
tgctttgtcgtcgacgaataccaggacgtcacgccgctgcagcagcgtgtgctcgacgcc
tggctcggcaaccgcgacgacctcaccgtcgtcggcgacgcgaaccagaccatctactcg
ttcaccggcgccaccccgcgttatctactcgacttctcacggcgctttcccgacgccgcg
gtggttcggcttgaacgtgactacaggtccactccgcaggtggtgtcgctggccaatcgg
gtcatcgccgccgcccgcggccggatggcgggcagcaagctgcacctcgtcggccagcgc
gaccctggacccaacccgaccttcaacgagcatcccgacgaggtcgccgaggccaacgca
gtggccaagaagatcaagaacctgatcgaatcgggcaccgcggccgccgaaatcgctgtg
ctgtatcgcatcaacgcgcagtccgaggtctacgaggaggcgctgaccgaggccggcgtc
ccattccaggttcgcggcggcgaagggttcttcagccgccaagagatccgccaggcgctg
ctggcgctgcagcgcgcggccgaacgagacgtcgaaggcgcacttcccgacatcgtgcgc
gccgtcctcgaaccgctgggtctgaccgccgaaccgccggcgggcacccgagcccgcgag
cggtgggaggcgctcgccgggcttgccgaactcgtcgacgaagaggtggcgctgcggccg
gcgttggaccttcgctcactgctggccgaactgcgtcagcgcgccgacgcacgccaccca
cccacagtgcagggcgtcacgctggcgtcgctgcacgccgcgaagggcctggagtgggat
gcggtgttcctcgttgggcttgccgacaacactttgcccatctcgcacgcgctcgcgcac
ggccccgacagcgaaccggtcgaagaggaacgccggttactttatgtcggaatcacaagg
gccagaacgcatttggcgctcagttgggcgttggccagggcgccgggcggtcggcagagt
cgacgttcgtcgcggttcctcaacggcatcgccccgcagtcgcccagtgacgccaccccg
aaccgagcgcgccgcccgcgcggtgccacaccacgctgtcgggtctgcaacggcgcgctg
acgacaccgccggcgatcatgctgcggcgctgcgaatcctgcccgtccgacatcgacgag
gagctcctcgcccagctgaaggattggcggctgcgcacctcgaaggagatgagcgtgcct
gcctatgtggtgttcaccgacaacacgctgatcgccatcgccgagacgctgccaaccgac
gatgcggggctggtcgcgatccccggcatcggcgcgcgcaagctcgagcagtacggcccg
gacgtgctggcgatggtgaaaggccggagccgctag
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