Mycobacterium sp. JS623: Mycsm_02085
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Entry
Mycsm_02085 CDS
T02423
Name
(GenBank) diguanylate cyclase (GGDEF) domain-containing protein
Organism
msa
Mycobacterium sp. JS623
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF_2
GAF
GAF_3
GGDEF_GdpP
Autoind_bind
MmlI
Motif
Other DBs
NCBI-ProteinID:
AGB22446
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Position
complement(2055622..2057469)
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AA seq
615 aa
AA seq
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MSSSLELVVTSVATQLMGVNAATSVEVSQRVLADLVEYFDVDVSFLRRNDHSIRASILVA
EWPVRPGIPDPDPLAVVYFADADPVFALAEHQKEPVVFRPEPATDDYQRTISESRQIPAT
SMACVPLLSGDETSGVLGFVKFGDRDWSAEELNALKAIASLFAQVQARVLAEEQLRYLAE
HDDLTGLHNRRALLAHLDSRLAAGQPGPVSALFFDLDRLKAINDYLGHTAGDWFIRVLAE
RLREGVDGPSLIARLGGDEFVVVPAKPMAADAAEALAYRLQSTLRERVAIDGEMLTRTVS
IGVALGVPGRDTTSDLLRRADQAVLTAKGSGGNKVAVFSDEMSLESEFRNDIELHLQSVI
ESGSLLLHYLPEVDMRTGEILAAEALVRWEHPTRGLLSPDSFIGVAESINLAGELGRWVM
RSACAEFARWRARGVGLDAVLRINVSPVQLVTDGFVESVAGIIAEFGLDGGSVCLEITES
VVVQDIETTRITLAGLKDAGVQVAIDDFGTGYSVLSHLKSLPVDTLKIDRGFVRDLGANP
GDLAIVRAVIALADAFGLQLVAEGVETEAAALTLLRHGCYRAQGFLLSRPVVGDAMAALL
ARGRIPVDFSAAPRL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaagcagcctggagctggtcgtcacgtcagtcgctacccaactgatgggggtgaat
gccgccacctcggtcgaggtgagccagcgagtactggcggacctcgtcgagtacttcgac
gtcgacgtcagcttcctgcggcgcaacgatcacagcattcgcgcctcgattctggtggcc
gagtggccggtccggcccggaatccccgacccggatccgctcgccgtcgtctattttgct
gacgctgatccggttttcgcgctcgccgagcatcagaaggaacccgtcgtcttccgcccg
gaacccgcgaccgacgactatcaacgcacgatcagcgagagcaggcagatcccggcgacc
tcgatggcgtgtgtgccgctgctgtcgggcgatgaaacctccggtgtgctcggcttcgtc
aagttcggcgaccgcgactggtccgcggaagaactcaacgcactcaaggcgatcgcttcg
ctgttcgctcaggtgcaggctcgtgtgctcgccgaagaacagctccgctacttggccgaa
cacgacgacctgaccggtctgcacaaccggcgcgcgctgttggcgcacctcgactcgcgg
ctggcagcgggccagccggggccggtgtcggcattgttcttcgacctggaccggttgaag
gccatcaacgactatctcggccacacggcgggcgactggttcatccgcgttctcgccgaa
cgactgcgcgaaggtgtcgatggtccgagcctgatcgcccggctcggtggcgacgagttc
gttgtcgtgcccgcgaagccgatggccgcggatgccgcagaggcgctggcctaccgcctg
cagtcgacgctgcgcgaacgggtcgccatagacggcgagatgctgacacgcacggtgagt
atcggtgtggcccttggtgttccgggtcgtgacacaacgtcggatttgctcaggcgcgcc
gatcaagcggtgctgaccgccaagggctcgggcggcaacaaagttgcagtgttctccgac
gagatgtcgctggaaagcgagtttcgcaacgacatcgagctccatctgcagagcgtgatc
gaaagcggatcgcttctgctgcactacctgccggaagtcgacatgcgcaccggcgagatc
ctggccgctgaggcgttggtgcgctgggagcatcccacccgcggactgctttctccagat
tcgttcatcggagtggccgaatcgataaacctcgcaggcgaattggggcgctgggtgatg
cgctcggcctgcgcggaattcgcgcgatggcgcgcccgcggggtggggcttgacgcagtg
ctgcgcatcaacgtgtcaccagtgcaattggtcaccgacggcttcgtcgagtcggtcgcc
ggcatcatcgccgaattcggcctcgacggcggatcggtctgtttggaaatcaccgaaagt
gttgtggttcaggacattgagaccactcgaatcacgctcgccggtctgaaggacgccggc
gtgcaggtcgcgatcgacgacttcggcacgggatacagcgtgctgtcacatctgaagtcc
ctgccggtcgacaccctcaaaatcgacagggggttcgtccgcgatctcggtgccaatccc
ggcgatctcgcgatcgtgcgtgcagtcatcgcactggccgatgcgttcggtttgcagctg
gtagccgagggggtggaaacagaggcggcggcactcacactgcttcgccacgggtgctat
cgcgcgcagggattcctgttgtcgcgccccgtcgtcggcgacgcaatggcggccctactg
gccaggggacggatacccgtcgacttttccgcagcgccacgtctgtag
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