Mycobacterium sp. JS623: Mycsm_02259
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Entry
Mycsm_02259 CDS
T02423
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
msa
Mycobacterium sp. JS623
Brite
KEGG Orthology (KO) [BR:
msa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msa03032
]
Mycsm_02259
03036 Chromosome and associated proteins [BR:
msa03036
]
Mycsm_02259
03400 DNA repair and recombination proteins [BR:
msa03400
]
Mycsm_02259
DNA replication proteins [BR:
msa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Mycsm_02259
Chromosome and associated proteins [BR:
msa03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Mycsm_02259
DNA repair and recombination proteins [BR:
msa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Mycsm_02259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HC2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AGB22607
UniProt:
L0IWA5
LinkDB
All DBs
Position
2222556..2223194
Genome browser
AA seq
212 aa
AA seq
DB search
MNKAELIDVLTEKLGSDRRSATDAVENVVDTIVRAVQKGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVISGAQKLPAEGPAVKRGATAGGARKAVKRAAV
KKAVKRTAAKKAVKRTAAKKAVKRTAAKKAVKRTAAKKAVKRTAAKKAVKRTAAKKAVKK
AAAKKAPAKKAAAKKTARKAPARKAPAKRGRR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcggagctcatcgacgtactcacggagaaactgggctcggatcgtcggtcg
gcaaccgatgcggtggagaacgtcgtcgacaccatcgtgcgtgcggttcaaaagggtgac
agcgtcaccattaccggcttcggtgttttcgaacagcgccgtcgtgccgctcgtgtcgcg
cgcaacccgcgcaccggcgagaccgtgaaagtcaagccaacatctgtgccggcctttagg
cccggtgctcagttcaaagcggttatctctggcgcacaaaaactcccggcggaaggacca
gcagtgaaacgtggcgcaaccgcgggcggcgcccgcaaggctgtgaagagggcggccgtc
aagaaggcagtgaagcggactgccgccaagaaggctgtgaagcggactgccgccaagaag
gcagtgaagcggaccgcagccaagaaggcagtgaagcggaccgcagccaagaaggctgtg
aagcggactgccgccaagaaggcagtgaagcgcactgccgctaagaaggccgtgaagaag
gccgctgctaagaaggctccggccaagaaggctgccgccaagaagacagcacgcaaggct
ccggcgcgcaaggctccggccaagcgcggccgtcgctaa
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