Mycobacterium sp. JS623: Mycsm_02629
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Entry
Mycsm_02629 CDS
T02423
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
msa
Mycobacterium sp. JS623
Brite
KEGG Orthology (KO) [BR:
msa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msa03016
]
Mycsm_02629
Enzymes [BR:
msa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Mycsm_02629
Transfer RNA biogenesis [BR:
msa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Mycsm_02629
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AGB22963
UniProt:
L0IWH5
LinkDB
All DBs
Position
complement(2573725..2574993)
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AA seq
422 aa
AA seq
DB search
MQDSPGDDPDAAAAAEPEAEATPLLAPRDGVPPLSISRTEIARAADVLASGHGPFAVDAE
RASGFRYSNRAYLVQIRRAGAGTVLIDPVNHGHDPIETLAPIAEVLATDEWVLHAADQDL
PCLAEIGIRPPKLYDTELAGRLAGYDRVNLAAMVQRLLGLQLMKGHGAADWSKRPLPDEW
LNYAALDVEVLLDLRDAIADVLAEQGKTDWAAQEFEFVRTYEATPTRRDRWRRTSGIHKV
RNPRALAAVRELWQTRDHIARRRDIAPGRILPDAAIINAATVNPDSIEKLTELPVFGGNR
QRRSAQVWLDALARARIVDPPDAQEPSNGPPPASRWSRRKPEAAVRLETARAVLTELSQR
VSVPTENLLSPELVRRLCWDWKPVDDVAAAVDEFLRDAGARPWQRELTVPVLAEALSERE
QK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcaggactcccccggggatgacccagacgccgcggccgctgctgaaccagaagccgag
gccaccccactgctggcgccgcgtgacggagtgccgccactatcgatcagccgaaccgaa
atagcaagggccgcagatgttttggcttccggacatggaccgttcgcggttgatgccgag
cgggcgtcgggcttcaggtactccaaccgcgcgtacctggtgcagatccgccgcgccggt
gcaggcacggtgctgatcgatccggtgaaccacggccacgacccgatcgagacgctggcg
ccgatcgccgaggtgctcgccaccgacgagtgggtgttgcacgcggccgatcaggatctg
ccgtgtctggccgagatcggcatcaggccaccaaagctgtatgacaccgagttggcgggc
aggctggccggctatgaccgggtgaatctggcggcgatggtgcagcgattgcttggccta
cagctgatgaagggacacggcgccgccgattggtcgaagcgtccgcttcctgacgaatgg
ctgaactatgcggccctggacgtcgaggtgctgctcgatttgcgcgacgcgattgccgat
gtgctggctgagcagggcaaaaccgattgggccgcacaggaattcgagttcgttcggacg
tacgaggcgacgccgacgcgacgagatcgctggcgacgcacgtcgggcattcacaaggta
cgcaacccgcgggcgctggccgcggtgcgggagttgtggcagacgcgcgaccacatcgcc
cgtcgccgcgatatcgcgccggggcggatcctgcccgacgccgcaatcatcaacgccgcc
accgtcaatccggacagcatcgagaagctgacggagcttccggtgttcggcggcaaccgg
caacgccgcagcgcgcaggtgtggctggatgcgctggcccgcgcacggatcgtggatccg
ccggacgcgcaggagccgtcgaacggcccgccgcctgcgtcgcgctggtctcggcgtaag
ccagaagcggccgtccggctggagaccgcgcgggcggtgttgaccgaactgtcgcaacgg
gtttcggtgccaacggagaacctgctctcccccgaattggtgcgccggctgtgctgggac
tggaagccggtcgacgatgtcgccgcggcggtcgacgagtttttgcgcgacgccggcgcg
cggccgtggcagcgcgagctgaccgtgccggtattggccgaggcactttccgagcgcgag
cagaaatag
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