Mycobacterium sp. JS623: Mycsm_03031
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Entry
Mycsm_03031 CDS
T02423
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
msa
Mycobacterium sp. JS623
Pathway
msa03030
DNA replication
msa03410
Base excision repair
msa03420
Nucleotide excision repair
msa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mycsm_03031
03410 Base excision repair
Mycsm_03031
03420 Nucleotide excision repair
Mycsm_03031
03440 Homologous recombination
Mycsm_03031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msa03032
]
Mycsm_03031
03400 DNA repair and recombination proteins [BR:
msa03400
]
Mycsm_03031
Enzymes [BR:
msa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mycsm_03031
DNA replication proteins [BR:
msa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Mycsm_03031
DNA repair and recombination proteins [BR:
msa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Mycsm_03031
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mycsm_03031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
DNA_pol_lambd_f
NYN_YacP
CNV-Replicase_N
Motif
Other DBs
NCBI-ProteinID:
AGB23352
UniProt:
L0IYF7
LinkDB
All DBs
Position
2971956..2974649
Genome browser
AA seq
897 aa
AA seq
DB search
MTASATAEKPTLMLLDGNSLAYRAFYALPAENFKTQGGLTTNAVYGFTAMLINLLRDEQP
SHIAAAFDVSRQTFRVDKYPEYKAGRSATPDEFRGQIDITKEVLVALGITVLAEPGFEAD
DIIATLATQAEDDGYRVLVVTGDRDSLQLVSDDVTVLYPRKGVSELTRFTPEAVLDKYGL
TPQQYPDFAALRGDPSDNLPGIPGVGEKTATKWIAEFGSLQSLVDNVDAVKGKVGDALRA
NLSSVVLNRELTDLVKDVPLAQTPDTLRMQPWDRDQIHRLFDDLEFRVLRDRLFDTLASA
DPEVDQGFDIKGGALEAGELADWLAQHKGGRFGMAVVGTHLAFDADATALAIVANDGDGR
YIDTATLHPDDEAALGSWLADASQPKALHEAKLAMHDLEGRGWKLAGVTSDTALAAYLVR
PGQRSFALDDLSLRYLKRELRADNPEQQQLSLLDDSEGVDDQAVQTVILRASAVMDLADA
LDEELARMECSSLLGDMELPVQRALAEMESAGIAVDLKQLGELQSEFADMIRDAAEAAYA
VIGKQINLGSPKQLQVVLFDELEMPKTKRTKTGYTTDADALQSLYDKTGHPFLQHLLSHR
DATRLKVTVDGLINSVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGRRIRDAF
VVGKGFHELMTADYSQIEMRIMAHLSKDEGLIEAFNTGEDLHSFVASRAFSVPIDEVTAE
LRRRVKAMSYGLAYGLSAYGLAAQLKISTEEAKVQMEQYFDRFGGVRDYLRDVVDQARKD
GYTSTVFGRRRYLPELDSSNRNVREAAERAALNAPIQGSAADIIKVAMINVDKALKESGL
KSRMLLQVHDELLFEVADGERADLEKLVREQMGNAYPLDVPLEVSVGFGRSWDSAAH
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcaagcgctaccgccgagaagcccacattgatgctgctggacggcaattcactg
gcgtatcgggccttctatgcgctgcccgccgagaacttcaagacccagggcgggctgacc
accaacgccgtctacgggttcaccgcgatgctgataaacctgctgcgcgacgaacagccg
tcacacatcgcggccgccttcgatgtctcccgccagacatttcgtgtcgacaagtacccg
gagtacaaagcgggccggtcggccacgccggacgaattccgcggccagatcgacatcacc
aaagaggtgctcgtcgcgctgggcatcacggtgctcgccgagccgggcttcgaggccgac
gacatcatcgccacgctggccacccaggccgaggatgacggctaccgcgtgctggtcgtc
accggcgaccgcgactcgctgcaactcgtcagcgacgacgtcacggtgctgtatccgcgg
aagggtgtcagcgagctgacgcggttcaccccggaggcagttctcgacaaatacgggctg
acgccgcagcaataccccgacttcgcggcgctgcgcggcgaccccagcgacaacctgccc
ggcatccccggcgtaggggagaagacggcgaccaagtggatcgcagaattcgggtcactg
cagtcgctggtcgacaacgtcgacgcggtcaagggcaaggtcggcgatgcgctgcgggcc
aacctgtcgagcgtggtgctcaaccgtgagctcaccgacctcgtcaaggatgtgccgctg
gcgcagacacccgacacgctgcggatgcagccgtgggaccgcgaccagatccaccggctg
ttcgacgacctggaattccgggtgctgcgcgaccggctcttcgacacgctggcgtcggcc
gatcccgaggtcgaccagggcttcgacatcaagggcggcgcgctcgaagcgggtgagctg
gccgactggttggcccagcacaagggcggccggttcgggatggcggttgtcggtacgcat
ctggcattcgacgccgacgccaccgcgctggccatcgtcgccaatgacggcgacggccgc
tacatcgacaccgcgacgctgcatcccgacgatgaggcggcgctggggtcgtggctggcc
gatgcaagccaaccgaaggcgttgcacgaggccaagctggccatgcacgacctcgaaggc
cgcggctggaagctggcaggcgtcacctccgacaccgcactcgccgcgtacctggtgcgt
cctggtcagcgcagtttcgccctcgacgacctgtcgctgcgctatctcaaacgtgaactg
cgcgcggataaccctgagcagcaacaactttcgttgcttgacgacagtgagggtgttgac
gatcaggccgtgcagacggttattcttcgcgccagcgccgtgatggatctggccgatgcg
ctcgacgaggaattggcccggatggagtgctcgtcgctgcttggcgacatggagctgccg
gtgcagcgcgcgctcgccgagatggagtccgcgggcatcgccgtcgacctgaagcagctg
ggcgagctgcagagtgagttcgccgacatgatccgcgacgcggctgaggcggcgtatgcg
gtgatcggcaagcagatcaacctgggctcgccgaagcagctgcaggtggtgttgttcgac
gagctggagatgccgaagaccaagcgcacgaagaccggctacaccaccgacgcggacgcg
ctgcagtcgctgtacgacaagacgggccaccccttcctgcaacacctgctgtcgcaccgc
gatgcgaccaggctcaaggtcaccgtcgacgggttgatcaactctgtcgcgtccgacggc
cgcatccacaccacgttcaaccagaccatcgccgccaccggacggttgtcgtcgaccgag
ccgaacctgcagaacatcccgatccgcaccgaggcgggccgccgcattcgcgacgcgttc
gttgtcggcaagggcttccacgaactgatgaccgccgactacagccagatcgagatgcgc
atcatggcgcacttgtcgaaggatgaaggcctcatcgaggcgttcaacaccggcgaagac
ctgcactcgtttgttgcctcgcgggcgttctcggtgccaatcgatgaggtcaccgccgaa
ctgcggcgccgggtcaaggcgatgtcgtacggcctggcgtatggattgagcgcgtacggc
ttggccgcgcagctgaagatctccaccgaggaagccaaggtgcagatggagcagtacttc
gaccggttcggcggggtgcgtgactatctgcgcgatgtcgtcgaccaggcgcgcaaggac
ggctacacgtcgacggtgttcggcaggcggcgctacctgcccgagctggacagcagcaat
cgcaacgtgcgtgaggccgccgaacgcgcggcgctcaacgcgccgatccagggcagtgcg
gccgacatcatcaaggtcgcgatgatcaacgtcgacaaggcgctcaaggagtccggtctg
aagtcgcggatgctgctacaggtgcacgacgaactcctattcgaggtcgctgacggcgag
cgcgccgacctcgagaagttggtacgcgagcagatgggcaacgcctatccgctggacgtg
ccgctcgaggtcagcgtgggtttcgggcggagctgggactcggcagcgcactga
DBGET
integrated database retrieval system
