Mycobacterium sp. JS623: Mycsm_04085
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Entry
Mycsm_04085 CDS
T02423
Name
(GenBank) DNA replication and repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
msa
Mycobacterium sp. JS623
Pathway
msa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Mycsm_04085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msa03400
]
Mycsm_04085
DNA repair and recombination proteins [BR:
msa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mycsm_04085
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mycsm_04085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
Motif
Other DBs
NCBI-ProteinID:
AGB24338
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All DBs
Position
complement(4013031..4013873)
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AA seq
280 aa
AA seq
DB search
MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQ
LHPGRNLDIVTQVQAIDAFATDIVNDYGRYTCACAVLETAERLAGEERAPAPALHRLTVA
ALRAVADGSRPRELVLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHVGAGGSVCVHC
RPSGSATPPQGVLDLMAALYDGDWEHAQASQSSYRSQASGLVAAHLQWHLERQLRTLPLV
ERTYRVDRTVAEHRVSVFGQDVSHGDQAGQDHLPTAAPGA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgtatcgggaccgggcggtcgtgctgcgtcagcacaagctcggcgaggccgac
cggattgtcaccctgctcacccgcgaccacgggttggtgcgcgcggtggccaagggggtg
cgtcgcacccgcagcaagttcggggcgcggctggagccgttcgcgcacatcgatgttcag
ctgcatcccggccgcaacctcgacatcgtcactcaggtacaggccatcgacgcgttcgcc
accgacatcgtcaacgactacggccgctacacctgcgcgtgcgccgtgctggagaccgct
gagcggctggcgggggaggaacgggctcccgcgcccgcgctgcaccggctcaccgtggcc
gcgctgcgggcggtggccgacggcagccgcccccgcgaactcgtgctcgacgcttatctg
ttgcgcgccatgggaatcgcgggctgggcgcctgcgctgaccgaatgcgcccgctgcgcc
acacctggtccgcaccgggcattccacgtcggggccggaggcagcgtgtgcgtgcactgc
cgcccgtcggggtcggcgaccccgccgcagggagtgcttgacctgatggccgcgctctat
gacggcgactgggagcacgcgcaggcatcgcagtcgtcgtatcgcagtcaggccagcggg
ttggtggccgcgcatctgcaatggcacctggaacgccagctgcgaacattgccgctggtc
gaacggacctaccgggttgatcgcacagtcgctgagcaccgcgtatcggtgttcgggcag
gatgtcagccatggcgatcaagcggggcaagaccacttacccacagctgcccccggcgcc
tga
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