Mycobacterium sp. JS623: Mycsm_04702
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Entry
Mycsm_04702 CDS
T02423
Name
(GenBank) 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
msa
Mycobacterium sp. JS623
Pathway
msa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mycsm_04702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msa03000
]
Mycsm_04702
03400 DNA repair and recombination proteins [BR:
msa03400
]
Mycsm_04702
Enzymes [BR:
msa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Mycsm_04702
Transcription factors [BR:
msa03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Mycsm_04702
DNA repair and recombination proteins [BR:
msa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Mycsm_04702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HHH
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AGB24931
UniProt:
L0J3V5
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All DBs
Position
4642102..4643577
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AA seq
491 aa
AA seq
DB search
MHEDFDRCYRAVQSKDARFDGWFVTAVLTTKIYCRPSCPVRPPFARNMRFYPTAAAAQRA
GFRACKRCRPDASPGSPEWNVRGDVVARTMRLIADGTVDREGVTGLAARVGYTIRQLERL
LQAEVGANPLALARAQRSQTARVLIETTELPFGDVAFAAGFSSIRQFNDTVRAVCDLTPT
TLRRRARTRFGRGNGALSLRLPVRTPFAYEGLFGHLAASAVPGVEEVRDGAYRRTLRLPN
GNGIVSLTPQPAHVQCQLVLDDFRDLSTAIARCRRLLDLDADPEAVVDALSADPDLTALV
AKAPGQRIPRTVDEQELAIRVVLGQQVSLKAARTHARRIVMAYGQPVTDFNGGLTHAFPA
VEHLAEIDPAHLAFPKSRQRSLTTLIRGMAQGEMVLDAGCDWNRAREQLLALPGIGPWTA
EVIAMRGLGDPDAFPASDLGVRLAARQLGLPGDARPLTERSMQWRPWRSYATQHLWTALD
HAVNEWPPKEK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaagatttcgaccgctgttaccgggccgtgcagtccaaggacgcccggttcgac
ggctggttcgtcactgccgtgctgaccacgaagatctactgccgaccgagttgcccggtc
cggccgccgttcgcccgcaacatgcggttttatccgacggctgcggccgcgcaacgggcg
ggtttccgcgcctgcaagcgctgccgaccggacgcctcgccgggctcgccggagtggaac
gtgcgcggcgacgtggtggcgcggaccatgcgcctgatcgccgacggcaccgtcgatcgt
gaaggcgtcaccggactcgctgcacgcgtcggctacaccatccggcagctcgagcggctg
ctgcaggccgaggtcggcgccaatccgctggcgctggccagggcgcagcgcagccagacc
gcgcgggtgctgatcgagacgacggagctgccgttcggcgacgtcgcgttcgcagcgggg
ttctcgagcatccgccagttcaacgacactgttcgtgcggtctgcgatctgacaccgacg
actctgcgccgacgcgcccgcacgcggttcgggcgaggcaacggcgcgttgtcgctgcgg
ctgccggtgcggacgccattcgcctacgaaggactgttcggtcatctcgcggcaagcgcg
gtacccggtgtcgaggaggtgcgcgacggcgcctaccggcgcactctgcgattgcctaac
ggcaacggaatcgtaagtctcacaccgcaacccgcccatgtgcagtgtcagctggtattg
gatgacttccgtgatctatccaccgcgatcgcccggtgtcggcgactgctggatctcgac
gccgatcccgaagccgtcgtcgacgcactcagcgccgaccccgacctgactgcattggtg
gccaaggcgcctggccaacggataccgcgcacggtcgacgagcaggagctggcgatccga
gtagtgctcggccaacaggtgtcgttgaaggccgcacgcacccacgcccgacgcatcgtg
atggcctacggtcagccggtcaccgatttcaatggcggtctgacgcatgcctttccggcg
gtcgagcatcttgcagaaatcgatcccgcgcatctggcgttcccgaagtcgagacagcga
tccctgacgacgctcatcagagggatggcgcagggagagatggtcctcgacgccggctgc
gactggaaccgcgcccgcgagcagctgttggcgctaccggggatcggcccttggaccgcc
gaggtgatcgcgatgcgtggtctaggggaccccgacgcgttcccagccagcgacttgggt
gtgcgacttgcggcgaggcagctggggctgcccggcgatgcccgcccgctgaccgagcgc
agtatgcaatggcggccatggcggtcgtatgcaactcagcacctatggacggccctcgat
cacgcggtcaacgaatggccgccgaaggagaagtga
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