KEGG   Mycobacterium sp. JS623: Mycsm_04730
Entry
Mycsm_04730       CDS       T02423                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
msa  Mycobacterium sp. JS623
Pathway
msa00300  Lysine biosynthesis
msa00470  D-Amino acid metabolism
msa01100  Metabolic pathways
msa01110  Biosynthesis of secondary metabolites
msa01120  Microbial metabolism in diverse environments
msa01230  Biosynthesis of amino acids
Module
msa_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:msa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Mycsm_04730
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Mycsm_04730
Enzymes [BR:msa01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Mycsm_04730
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AGB24956
UniProt: L0J3X6
LinkDB
Position
complement(4671524..4672945)
AA seq 473 aa
MIAHPAGPRHADEMQHGGAPPRPQSAADVLTLAPNVWPRSTVRGDDGVVSIAGVPVTDIA
AEFGTPAFVIDEDDFRSRCREIAAAFGGGDNVHYAAKAFLCTEVARWVEQEGLSLDVATG
GELAVALHATFPPDRITLHGNNKSVDELTTAVKAGIGHVVLDSMTEIERLDEIAGAAGAV
QDVLVRVTVGVEAHTHEFISTAHEDQKFGLSLASGAAMDAIRRVFATDNLRLVGLHSHIG
SQIFDVDGFELAAHRVIGLLRDVVAEFGVDKTSQLETVDLGGGLGISYLPQDDPPPITDL
AAKLSAIVRNESAAVGLPAPRLVVEPGRAIAGPGTITLYQVGTVKDVDIATDKNRRYISV
DGGMSDNIRTSLYGAEYDVRLVSRVSEMPAMLSRVVGKHCESGDIVVKDAWLSDDVAPGD
LLGVAATGAYCYSMSSRYNLIGRPAVVAVRNGQARLVLRRETVDDLLSLEVTK
NT seq 1422 nt   +upstreamnt  +downstreamnt
gtgatcgctcaccccgccgggccccggcacgctgacgaaatgcagcatggcggcgcgccg
ccccgcccgcagtccgcagccgatgtcctgacgctcgccccgaatgtgtggccgcgcagc
accgttcgcggcgacgacggtgtcgtgtcaatcgccggcgttcccgtcaccgacatcgcc
gccgagttcggcactcccgccttcgtgatcgacgaagacgacttccgatcacgctgccgc
gagatcgccgcggcgttcggcggtggcgacaacgtccactacgccgccaaggccttcctg
tgcaccgaggtggcacgctgggtcgagcaggagggtctgtccctcgacgtggcgaccggc
ggcgagctcgccgttgcactgcatgccacctttcctcccgatcgaatcacgttgcacggc
aacaacaaatccgtcgacgagctgacgacggccgtcaaggccggcatcggtcacgtcgtg
ctcgactcgatgaccgagatcgaacgcctcgacgagatcgccggtgcggccggcgccgtg
caggacgtcctggtccgcgttaccgtcggtgtggaggcccacacccacgaattcatctcc
accgcccacgaggaccagaagttcggcctgtcactggccagcggtgcggcgatggacgca
atcaggcgcgtcttcgccaccgacaacctgcgtctcgtcggcctgcacagccacatcggc
tcgcagatcttcgacgtcgacggattcgagttggccgcccaccgggtgatcggactgctg
cgcgacgtcgtcgccgagttcggtgtggataagaccagccaactcgagaccgtcgacctc
ggcggcggactgggtatttcctatctgccgcaggatgatccgccaccgatcacagacctg
gccgccaagctcagcgccatcgtccgcaacgaatccgccgccgttggcctgcccgcgccg
cgactcgtcgtggagcccggccgcgccatcgcggggcccggcaccatcacgctgtaccag
gtcggcaccgtcaaagacgtcgacatcgcgaccgataagaatcgccgctacatcagcgtc
gacggtggcatgagcgacaacatccgcacgtcgctctacggtgccgaatacgatgtacgt
ctggtttcgcgcgtcagtgaaatgccggcgatgctgtcgcgtgttgtcggaaagcattgc
gagagcggcgatatcgtcgtcaaagacgcgtggctgtccgacgacgtcgcgcccggggac
ctgctgggcgtcgccgccacgggcgcctactgttattccatgtcgagccgttacaacctg
atcggccgccccgcggtggtggccgtgcgcaacgggcaagcccgcctggttctgcgccgg
gagacggtcgacgatctgctgagtttggaggtaacgaaatga

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