Mycobacterium sp. JS623: Mycsm_04730
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Entry
Mycsm_04730 CDS
T02423
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
msa
Mycobacterium sp. JS623
Pathway
msa00300
Lysine biosynthesis
msa00470
D-Amino acid metabolism
msa01100
Metabolic pathways
msa01110
Biosynthesis of secondary metabolites
msa01120
Microbial metabolism in diverse environments
msa01230
Biosynthesis of amino acids
Module
msa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
msa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Mycsm_04730
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Mycsm_04730
Enzymes [BR:
msa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Mycsm_04730
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AGB24956
UniProt:
L0J3X6
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All DBs
Position
complement(4671524..4672945)
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AA seq
473 aa
AA seq
DB search
MIAHPAGPRHADEMQHGGAPPRPQSAADVLTLAPNVWPRSTVRGDDGVVSIAGVPVTDIA
AEFGTPAFVIDEDDFRSRCREIAAAFGGGDNVHYAAKAFLCTEVARWVEQEGLSLDVATG
GELAVALHATFPPDRITLHGNNKSVDELTTAVKAGIGHVVLDSMTEIERLDEIAGAAGAV
QDVLVRVTVGVEAHTHEFISTAHEDQKFGLSLASGAAMDAIRRVFATDNLRLVGLHSHIG
SQIFDVDGFELAAHRVIGLLRDVVAEFGVDKTSQLETVDLGGGLGISYLPQDDPPPITDL
AAKLSAIVRNESAAVGLPAPRLVVEPGRAIAGPGTITLYQVGTVKDVDIATDKNRRYISV
DGGMSDNIRTSLYGAEYDVRLVSRVSEMPAMLSRVVGKHCESGDIVVKDAWLSDDVAPGD
LLGVAATGAYCYSMSSRYNLIGRPAVVAVRNGQARLVLRRETVDDLLSLEVTK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgctcaccccgccgggccccggcacgctgacgaaatgcagcatggcggcgcgccg
ccccgcccgcagtccgcagccgatgtcctgacgctcgccccgaatgtgtggccgcgcagc
accgttcgcggcgacgacggtgtcgtgtcaatcgccggcgttcccgtcaccgacatcgcc
gccgagttcggcactcccgccttcgtgatcgacgaagacgacttccgatcacgctgccgc
gagatcgccgcggcgttcggcggtggcgacaacgtccactacgccgccaaggccttcctg
tgcaccgaggtggcacgctgggtcgagcaggagggtctgtccctcgacgtggcgaccggc
ggcgagctcgccgttgcactgcatgccacctttcctcccgatcgaatcacgttgcacggc
aacaacaaatccgtcgacgagctgacgacggccgtcaaggccggcatcggtcacgtcgtg
ctcgactcgatgaccgagatcgaacgcctcgacgagatcgccggtgcggccggcgccgtg
caggacgtcctggtccgcgttaccgtcggtgtggaggcccacacccacgaattcatctcc
accgcccacgaggaccagaagttcggcctgtcactggccagcggtgcggcgatggacgca
atcaggcgcgtcttcgccaccgacaacctgcgtctcgtcggcctgcacagccacatcggc
tcgcagatcttcgacgtcgacggattcgagttggccgcccaccgggtgatcggactgctg
cgcgacgtcgtcgccgagttcggtgtggataagaccagccaactcgagaccgtcgacctc
ggcggcggactgggtatttcctatctgccgcaggatgatccgccaccgatcacagacctg
gccgccaagctcagcgccatcgtccgcaacgaatccgccgccgttggcctgcccgcgccg
cgactcgtcgtggagcccggccgcgccatcgcggggcccggcaccatcacgctgtaccag
gtcggcaccgtcaaagacgtcgacatcgcgaccgataagaatcgccgctacatcagcgtc
gacggtggcatgagcgacaacatccgcacgtcgctctacggtgccgaatacgatgtacgt
ctggtttcgcgcgtcagtgaaatgccggcgatgctgtcgcgtgttgtcggaaagcattgc
gagagcggcgatatcgtcgtcaaagacgcgtggctgtccgacgacgtcgcgcccggggac
ctgctgggcgtcgccgccacgggcgcctactgttattccatgtcgagccgttacaacctg
atcggccgccccgcggtggtggccgtgcgcaacgggcaagcccgcctggttctgcgccgg
gagacggtcgacgatctgctgagtttggaggtaacgaaatga
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