Mycobacterium sp. JS623: Mycsm_04906
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Entry
Mycsm_04906 CDS
T02423
Name
(GenBank) isopentenyl-diphosphate delta-isomerase
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
msa
Mycobacterium sp. JS623
Pathway
msa00900
Terpenoid backbone biosynthesis
msa01100
Metabolic pathways
msa01110
Biosynthesis of secondary metabolites
Module
msa_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
msa_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
msa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Mycsm_04906
Enzymes [BR:
msa01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
Mycsm_04906
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
AGB25125
UniProt:
L0J0L5
LinkDB
All DBs
Position
4854397..4854948
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AA seq
183 aa
AA seq
DB search
MPETALAGTDELVVLVDDDGRELGTAAKASVHHEKTPLHLGFSCYVFDADGRVLMTRRAL
GKRTWPGVWTNSFCGHPAPGEAVMDAVHRRARQELGLSIDGLTCVLPDYRYRAVAADGTV
ENELCPVFCTTAAGPVRPVPDEVMDHAWVPGAELRTAAGLRWAISPWAAEQIPLLEGAGG
PNQ
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagaccgcactagccggcaccgacgaattggtcgtgctcgtcgacgacgatgga
cgagagcttggaaccgccgccaaagcctccgtccatcacgagaagacacctctgcatctg
ggcttctcctgctacgtgttcgacgccgacggccgcgtcttgatgaccaggcgggcactc
ggcaagcggacatggcccggggtgtggacgaattcgttctgcggccatcccgctccgggt
gaagctgtcatggacgcggtgcaccgacgggctcgccaggaactcggcctgagtatcgat
ggactgacatgtgtgctgcccgactatcggtaccgcgcggttgccgccgacggcacggtc
gaaaacgaactctgcccggtgttctgcaccactgcggcggggcccgtccgcccggtgccc
gacgaggtcatggaccacgcctgggtgccaggggccgaattgcggacggccgctggcctg
cgctgggcgatcagcccgtgggcggccgagcagatcccactgctcgagggtgctggtggc
ccgaatcagtga
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