Mycobacterium sp. JS623: Mycsm_05201
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Entry
Mycsm_05201 CDS
T02423
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
msa
Mycobacterium sp. JS623
Pathway
msa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Mycsm_05201
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msa02000
]
Mycsm_05201
Transporters [BR:
msa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Mycsm_05201
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Chromo_shadow
Motif
Other DBs
NCBI-ProteinID:
AGB25402
UniProt:
L0J479
LinkDB
All DBs
Position
complement(5152581..5154206)
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AA seq
541 aa
AA seq
DB search
MFETTHPRSNPSGPQWDRRAFLKAGGITVGGISLAALIAACGGAPGGSGNGGTLVLRMPF
LADMQVPDPDIMYEGEGVQVMESAYEGLVRYKPGTSDFLPSLAKSWTVSPDQLTYTFTLQ
PNVKFHDGTIADAQAWTKSFDRRGRINQGPSYMVAGVVKTEAPDPTTFVVTLKEPNNAFL
HYLACPWQPFAVSPTAVAKNAVGDDMAQEWLKTHDAGTGPYIIKEFVTGSHYTLEAFGDY
WGEKPVFKSIRIDITPSVATQKLQLDSGAFDMVTKGFAIPDVLAYQKNTQFAVVNSFGGV
GEAIWLNPTSGIFANKALRKAMLTALDRKTIVDTAWGGLAKVQNAMWPELTLNPALAPFP
SQLDTAALKAIVPTLPSKKIDLAWSADGGAPRGQMAELIQNQLAAFGLDVTVRQMPVAEE
FDLPNQAPEKRPDMLVSFLGGDALHLDTTLRILLRTGAKPLNFYQYSNPELDKLMDDAVQ
QADWVQAQQIYQKCSQMVVDEAIWIPLCIPPNSTIAHSYVIGVEDNSFYPAIFWPQSLKR
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgagacaacacacccgcggagcaacccgtccggtccgcagtgggaccgccgcgca
ttcctgaaggcaggtggcatcaccgtcggcggcatcagcctcgccgctctgatcgccgca
tgcggtggcgcgccgggcggttcggggaacggcgggacgcttgtcctgcgcatgccgttc
ctggccgacatgcaggttcccgaccccgacatcatgtacgagggcgagggcgtgcaggtg
atggaatcggcctatgagggactcgtgcgctacaaacccggcacctcggacttcctaccg
agtctggcgaagtcgtggacggtctcaccggaccaactgacgtataccttcacgctgcaa
ccgaacgtgaagttccacgacggaacgatcgccgacgcgcaagcgtggaccaagagcttc
gaccgtcgcgggaggatcaaccagggcccctcgtacatggtcgcgggtgtggtcaagacc
gaggcgccggacccgacgacgttcgtcgtcacgctcaaggagccaaacaacgcgttcttg
cactatctcgcctgcccgtggcagccgttcgcggtcagcccgaccgccgtggccaagaat
gccgtcggcgacgatatggcgcaggagtggctgaaaacccatgacgcgggcactggaccg
tacatcatcaaggagttcgtcaccggcagccactacacgctcgaggcattcggtgattat
tggggcgagaagccggtgttcaagagcatccgcatcgacatcacgccgagtgtggcgacc
cagaagctacagctggattccggcgcattcgacatggtgacaaagggtttcgcaatcccc
gacgtgcttgcctaccagaagaacactcagttcgcggtcgtcaattcgttcggcggtgtc
ggcgaggcgatctggctcaacccgacatcgggcatcttcgcgaacaaggcgctccgcaag
gccatgctcaccgccctggaccgcaaaacgatcgtcgacacggcatggggcgggctggcg
aaggtgcagaacgcgatgtggccggagctcaccctcaacccggcactggcgccgtttccg
tcgcaactcgacacagcggcgctcaaggcgatcgtgccgacacttccttcgaagaagatc
gacctcgcgtggagcgccgacggcggagcgccccgcgggcagatggccgagctcatccag
aaccagcttgcggcgttcgggctcgacgtcacggtgcgccaaatgccggttgccgaggaa
ttcgacctgcccaaccaggcacccgagaagcggccggacatgctggtgtcttttctcggc
ggtgatgcgctacacctggacacgacgctccggatcctgctccgtaccggcgccaaaccg
ctgaatttctaccagtattcgaatcccgagctcgacaagctgatggacgatgcggtccag
caggcggattgggtgcaagcacaacagatctaccagaaatgcagccagatggtcgtcgac
gaggcgatctggatcccgctctgcattccgccgaactccacgatcgcgcacagttacgtg
atcggcgtcgaagacaactcgttctatccggcgatcttctggccgcaatccctcaagcgg
gcctag
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