Mycobacterium sp. JS623: Mycsm_05292
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Entry
Mycsm_05292 CDS
T02423
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msa
Mycobacterium sp. JS623
Pathway
msa03420
Nucleotide excision repair
msa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mycsm_05292
03430 Mismatch repair
Mycsm_05292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msa03400
]
Mycsm_05292
Enzymes [BR:
msa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mycsm_05292
DNA repair and recombination proteins [BR:
msa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mycsm_05292
MMR (mismatch excision repair)
Other MMR factors
Mycsm_05292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AGB25490
UniProt:
L0J1Q4
LinkDB
All DBs
Position
complement(5248312..5250624)
Genome browser
AA seq
770 aa
AA seq
DB search
MSLHVTDLNSDSEALLDGLNPQQRNAVLHEGTPLLIVAGAGSGKTAVLTRRIAYLLAARE
VGVGQVLAITFTNKAAAEMRERVVQLVGPRARAMWVSTFHSTCVRILRNQASLLPGLNSN
FSIYDADDSRRLLLMIGKDMGLDTKRYSPRLLANGISNLKNELIGPEQAAYDASNAMEDL
PRIIAEVFAEYQRRLRAANALDFDDLIGETVAVLQAFPQIAQYYRRRFRHILVDEYQDTN
HAQYVLVRELVGRETEDGVAPAELCVVGDADQSIYAFRGATIRNIEDFERDFPNATTILL
EQNYRSTQNILSAANSVISRNAGRREKRLWTDAGEGELIVGYVADNEHDEARFVAEEIDA
LADRGEITYNDVAVFYRTNNSSRALEEVFIRAGIPYKVVGGVRFYERREIRDIVAYLRVL
DNPGDSVSMRRILNTPRRGIGDRAEACVAVYAENTGLSFNDALQAAAEGKVPMLNTRSEK
CIASFVELLDDLRGKLDDELGNVVEAVLDRTGYRTELESSSDPQDLARLDNLNELVSVAH
EFSTDLANAQAMGEVDPTDEDIPDTGVLAQFLERVSLVADADELPEHGAGVVTMMTLHTA
KGLEFPVVFVTGWEDGMFPHMRALGDPTELSEERRLAYVGITRARQRLYVSRARVRSSWG
QPMLNPESRFLKEIPQELIDWRRVEPPPSLSAPVSGAGRFGMQRPSPTRSAAGKRPLLVL
QPGDRVNHDKYGLGRVEEVSGVGESAMSLIDFGSAGRVKLMHNHAPVSKL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgcacgtgaccgacctgaattccgactccgaagccctgctggacggcctgaac
ccgcaacagcgcaatgcagtgctgcacgagggcacgcccctgctgatcgtcgccggcgct
ggctccggcaagaccgcggtgctgacgcggcggatcgcctacttgctggccgcccgcgag
gtcggcgtcggccaggtgctggccatcacgttcaccaacaaagccgcggccgagatgcgc
gagcgcgtggtgcagctagtcggcccgcgggcccgcgcgatgtgggtgtcgacgttccac
tccacctgcgtgcggatccttcgcaatcaggcgtcgctgctgcccgggctgaactcgaac
ttctccatctacgacgccgacgactcgcggcggctgctgctgatgatcggcaaggacatg
gggctggacaccaagcggtactcgccgcggttgctggccaacgggatctccaacctgaag
aacgagctgattggtcccgagcaggcggcctacgacgcgtcgaacgcgatggaggatctg
ccgcggatcatcgccgaggtgttcgcggaatatcagcgtcggttgcgcgcggccaacgcg
ctggacttcgatgacctgatcggcgagacagtcgctgtgctgcaagcgtttccgcaaatt
gcgcagtactaccgcaggcggttccggcacatcctggtcgacgagtatcaagacaccaac
cacgcgcagtacgtgttggtgcgcgagctggtgggtcgcgagaccgaggacggtgtcgcg
ccggccgagctgtgcgtggttggcgacgccgaccagtcgatctacgcgttccgcggcgcc
actatccgcaacatcgaggacttcgaacgcgacttccccaatgccacaacgattctgctc
gaacagaactaccgctcgacgcagaacatcctgagcgctgcgaactccgtgatctcccgc
aacgccgggcggcgcgagaagcggttgtggaccgacgccggggagggcgagctcatcgtc
ggctacgtcgccgacaacgagcacgacgaggcgcgcttcgtcgccgaggagatcgacgca
ctcgccgacagaggcgagatcacctacaacgacgtcgccgtcttctaccgcaccaacaac
tcgtcgcgcgcgctggaagaggtgttcattcgcgcgggcattccgtacaaagtcgttggc
ggcgttcgcttctacgaacgcagggagatccgcgacatcgtcgcgtatctgcgggtcctg
gacaaccccggtgactcggtgagcatgcggcgaatcctgaacacaccgcgccgcggcatc
ggcgatcgcgccgaggcatgcgtcgcggtgtacgcggagaacaccgggctgagcttcaac
gacgcactgcaggcggccgcggagggtaaggtgccgatgctgaacacccgctcggagaag
tgcatcgcgagtttcgttgagctgcttgacgatctgcgtggcaagctggatgacgagctc
ggcaatgtcgttgaagccgtcctcgaccgcaccggttatcggaccgagctggaatcctcc
agcgacccacaggacctcgcgcggctggacaacctcaacgaattggtcagcgtcgcacac
gaattcagtaccgacctggccaacgcacaggcgatgggtgaagtcgacccgaccgacgag
gatattcccgacaccggcgtcctcgcccagttcctggagcgggtgtcgctggtcgccgac
gccgacgaactgcccgagcacggcgccggtgtcgtgacgatgatgacgctgcacaccgca
aaggggctggagttcccggtggtgttcgtgaccggctgggaggacggcatgttcccgcac
atgcgggcacttggcgatccgaccgagctgtccgaagagcggcggctggcctacgtcggc
atcaccagggccaggcagcggctgtacgtcagccgggccagggtccggtcgtcgtggggc
cagccgatgctcaacccggaatcccggttcctcaaggagatcccgcaggagctcatcgac
tggcggcgcgtcgagccgccaccgtcgctgtcagcacccgtcagcggtgcaggcaggttc
ggcatgcagcgcccgtcgccgacgcgctcagcggcaggtaagcgcccgctgctggtgctg
cagccgggggaccgggtcaaccacgacaagtacggcctcggccgggtcgaggaggtgtcc
ggcgtcggtgagtcagcgatgtcgctgatcgacttcggcagtgccgggcgggtcaagctg
atgcacaaccacgcgccggtgtccaagctgtag
DBGET
integrated database retrieval system
