Mycobacterium sp. JS623: Mycsm_05892
Help
Entry
Mycsm_05892 CDS
T02423
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
msa
Mycobacterium sp. JS623
Brite
KEGG Orthology (KO) [BR:
msa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msa03400
]
Mycsm_05892
DNA repair and recombination proteins [BR:
msa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mycsm_05892
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_25
ATPase
DUF7125
Zn_ribbon_LapB
DnaB_C
ChlI
DUF8455
AAA
AAA_30
AAA_16
nSTAND_NTPase5
AAA_22
NACHT
DUF7129
AAA_19
Lon_C
Rad51
nSTAND3
AAA_29
AAA_5
AAA_24
MCM
SLFN-g3_helicase
ABC_tran
AAA_14
RsgA_GTPase
NTPase_1
Zn_ribbon_8
PAXNEB
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AGB26059
LinkDB
All DBs
Position
5858921..5860291
Genome browser
AA seq
456 aa
AA seq
DB search
MAKARSQYRCSECHHVTPKWVGRCPDCGTWGTVDEVAVLAAVNGSAARRAVAPTSPAVPI
SSIDPGNTRHFHTGVSELDRVLGGGLVPGSVTLLAGDPGVGKSTLLLEVAHRWAQAGRRA
LYLSGEESAGQIRLRAERTRCTHDEVYLAAESDLQMALGHIDQVQPSLVVVDSVQTMSTT
EADGVTGGVTQVRAVTTALTMTAKTSGVAMLLVGHVTKDGAIAGPRSLEHLVDVVLHFEG
DRTSALRMVRGVKNRFGAADEVGCFLLHDNGIECVADPSGLFLDQRPKPVSGTAVTVTLD
GKRPLIGEVQALIGSPASGSPRRAVSGIDSSRAAMITAVLEKRARLPVGTNDIYLSTVGG
MRLTDPSSDLAVALAIASAYTDLAMPANAVAIGEVGLAGDLRRVSGMERRLSEAARLGFG
CAIVPAGVTSVPTGLRALPADNIQTALRVLREISQT
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaagcgcgttcgcagtaccgctgctcggaatgccaccacgtcaccccgaaatgg
gttggccggtgtcctgattgcggcacctggggcaccgtcgatgaagtcgcggtgctggcc
gcggtcaacggctcggcagcccgtcgcgcggtcgcgccgacctctcccgcggtgccgatc
agctcgatcgacccgggcaacacccgccacttccacactggcgtcagtgaattggaccgt
gtgctcggcggcggtctggtccccggctcggtgactctgctcgcgggtgacccgggcgtc
ggcaagtcgacactgctgctcgaggtcgcccaccgctgggcacaggcaggcaggcgcgcg
ctgtacctctccggcgaggagtccgcgggccagatccggctgcgcgccgaacgtacgcgc
tgcacccacgacgaggtctacctggccgccgaatcggatctgcagatggcgctcggccac
atcgaccaggtgcagcccagcctggtggtcgtcgactcggtgcagaccatgtccaccacg
gaggccgacggcgtcaccggcggagtcacccaggtgcgggcggtcacgacggcactgacc
atgaccgccaagacatccggcgtggcaatgcttctcgtcggccacgtcaccaaggacggc
gcgatcgccgggccgcgctcccttgagcatctcgtcgacgtggtgctgcacttcgagggc
gaccgcacgtcggccctgcgaatggtgcgcggcgtgaagaaccgcttcggcgccgccgac
gaggtcggctgtttcctgttgcacgacaacggaattgagtgcgtcgccgacccgtcgggc
ctgttcctggaccagcggcccaagccagtgtcgggcaccgcggtgacggtcacgctcgac
ggcaaacgaccgctgatcggcgaagtgcaggcactgatcggctcgcctgccagcggttcg
ccgcgccgggcggtcagcggcatcgattcctcgcgcgcagcgatgatcaccgcggtgctg
gagaagcgcgcccggctgcccgtcggtaccaacgacatctatctgtcgacggtcggcggc
atgcggctgaccgacccgtcctcggatctggcggtggcacttgcgatcgcgtccgcctat
accgaccttgcgatgcccgccaacgccgtggcgatcggagaggtcgggctggcaggcgat
ttgcgccgggtcagcggcatggaacgcaggctctcggaggcggccaggctgggcttcggc
tgcgccatcgtgcccgccggcgtcacgtcggtgcctacgggattgcgggccctgcccgcc
gacaacattcagacggcgttgcgggtgctcagggagatcagtcagacttga
DBGET
integrated database retrieval system
