KEGG   Mycobacterium sp. JS623: Mycsm_06582
Entry
Mycsm_06582       CDS       T02423                                 
Name
(GenBank) WD40 repeat-containing protein
Organism
msa  Mycobacterium sp. JS623
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd ANAPC4_WD40 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_EML WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_TEP1_C NBCH_WD40 Ge1_WD40 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 RMC1_N eIF2A Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_RIG_2nd DUF7165 Cytochrom_D1 Beta-prop_HPS5 TIR_2 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 TruB_C PROPPIN ThsB_TIR TIR
Other DBs
NCBI-ProteinID: AGB26718
UniProt: L0J750
LinkDB
Position
pMYCSM01:97015..99795
AA seq 926 aa
MLADSKPARLGGRAEASSFLYDAFISYAHDDQPVARGVQRGLHRVGRRVGALRALRVFRD
STDLTASPDLWGKVVEAMRRSRYLIVVLSPDAADSKWVKREVAHWLLERGPEYMFFVVGS
GRVAWDEATKRFDPDHSDAAPAALTESGVLPTEPLYVDVSGDAPWNPDAPLFREKLIDLA
APIHGKPKDELASEDLREQRRSRRLRRAAVAALAVVTVCAVAAAGIAVTQKREADRQRDE
AVALALAAAARESAHANPALGVALAAESALATPEPTWQARGALVSARAAMSAAAAQQIGE
PLTAHRAIVDSLGFSPDGRVLASASDDGTVREWDPVTRQQVGQPLTGGTGKVYAVAFSPD
GHVLASCDDKGNVRLWDSDTRQQLGESLNAHGETVFDVAFSPDGRLLAAADGDGSVRLWD
PAAHQPVGEPLTGHSGPVNSVAFSPDGRLLASGSFDGTVRLWDPVTRRPVGPPLTGHVDS
VNALAFSPDGRVLASGGVDGSVRLWDSVTHRPVGPPLTDAVGDVSALAFSGDGHLLGSAG
ANGIQLWDPGTRRPVGEPLAANTNNISALAFSPQGSILASAGMDGTVQLWDTAIRQPTGQ
LLTHHAESVSSLAFSPDGRLLASGSFDFTVQVSDPAALRPIGEPITIGVPVSAVAFSPNG
KLLAIGDMHAGIRLWDLSQHRQDGGPLTGHTDTVQGIAFSPDGHLLATASNDHSVRLWET
ATRRPVGAPLGHTADVYSVAFSPDGRLLASAGGDGVRLWDTATRQQVGQPLTAQSNTWVH
AVAFSPDGRLLASAGTGGVILWDVAARRPATQPLIGHTSWASAVAFSPDGRLLASAGADH
VVRLWDVATGRPIGDPLTGHSDAVTAVAFRPDGHLLASGSADYSVRLWQPIWETGTACEL
AEPYVTKAQVISYMPPGRVPACPYRL
NT seq 2781 nt   +upstreamnt  +downstreamnt
atgcttgctgacagcaagccggcccgactgggcggtcgggcagaagcatcgtcgttcctc
tacgacgccttcatctcctacgcccatgacgatcagcccgtcgcccgcggggtacagcgg
ggattgcatcgggtagggcgacgtgtcggcgcgctgcgggcgctgcgggtcttccgtgac
tccaccgatttgacggccagccccgatctatgggggaaggtagtcgaggcgatgcgacgg
tcgcggtatctcatcgtcgtgctgtcgcccgatgcagccgattcgaagtgggtcaaaaga
gaagtcgcccactggcttctggagcgcgggcctgagtacatgttcttcgtcgtgggttcc
ggtcgcgtcgcctgggacgaagccacgaaacgattcgatcccgatcactcggatgcggcc
ccggcggccctcaccgaatccggtgttctgccgacagaaccgctgtacgtcgatgtcagc
ggcgatgcgccgtggaatccggatgcaccattgtttcgggagaagctcattgacttggcc
gcgccgatacacggcaaacccaaagacgaactggccagcgaagatttgcgcgaacagcgc
cgttcccgtcgtctgaggcgagcggccgtcgcggcactcgccgtggtgacggtgtgtgca
gtggcggccgcggggattgccgtgacgcagaagcgcgaagctgacaggcagcgtgacgaa
gcggtggcactcgcgttggcggcagcggcacgcgaatccgctcatgccaatccggcgctc
ggtgttgcgctggccgctgaaagcgccttggcgacgccggaaccgacgtggcaggccagg
ggcgcgctggtatctgctcgcgcggccatgagcgcggcggccgcccagcagatcggcgag
ccactgaccgcccacagggccatcgtcgactcgttagggttcagtccggacgggcgtgtg
ctggcgtcggcgagcgacgacgggacggtgcgagagtgggacccggtgacgcgtcagcag
gtcggccagcctctgaccggaggcaccggcaaggtctatgcggtggcgttcagtcccgat
ggtcacgtgctggcctcgtgcgacgacaaaggcaatgtacggctatgggattcggacacc
cgccagcagctcggtgaatcgctcaacgcgcacggcgaaaccgtcttcgacgtggctttc
agccccgacggccggctgctggccgcggccgatggcgacggcagtgtgcggctgtgggat
cctgcggcgcatcaaccggtcggcgaaccgctcaccggccacagcggcccagttaacagc
gttgcgttcagccctgacgggcgcctgttggcctcgggtagctttgacggcaccgtgcgg
ctgtgggatccagtgacccgccggcctgtcggtccgccgttgaccggtcacgtcgacagc
gtcaacgcgctggcgttcagccctgatggccgcgtgttggcctccggtggcgtggacggc
agtgtgcgactttgggattcagtgactcaccggcctgtcggtccgccgctgaccgatgcc
gttggagacgtgagtgcgctggcattcagcggtgacgggcatctgctgggctcggctggc
gccaacggcatccagctgtgggatccggggacacgtcgaccggtcggtgaaccgctggcc
gccaacacaaacaacatttcggcgttggctttcagccctcagggatcgatcctcgcgtcg
gccggcatggatggcactgtgcagctgtgggatacggcgattcggcagccgaccggacaa
ctcctcacccaccacgccgaatcggtgagctccctcgcgttcagtcccgacggccgcctg
ctcgcctcgggcagcttcgatttcaccgtgcaggtgtccgatcccgcggcgctacgtccg
ataggcgaaccgatcaccatcggggtgccggtcagtgcagtggcgttcagccccaacgga
aaattgctggccataggtgatatgcacgccggaatacggctctgggacctgagtcaacat
aggcaggatgggggccctctcaccggtcacacggacacggtgcaggggattgccttcagc
cccgacgggcacctgctggccacggccagcaacgatcacagcgtgcggctgtgggagacc
gcgacccggcgtccagtcggagctcctctcggccacaccgcagacgtgtattcggtggcg
ttcagtcccgacggccggctactcgcgtccgccggcggcgacggcgtgcggctgtgggac
accgcgactcgtcaacaagtgggccaaccactgaccgctcaaagcaacacgtgggtgcat
gccgtggcattttcccccgacggacgcctccttgcctccgcgggcaccggcggcgtgatc
ctctgggacgtggcggcgcgacggcccgcgacccaaccgcttatcgggcacacgagctgg
gcatcggccgtggcgttcagtcccgatggccgactgctcgcctccgccggcgcggaccac
gtcgtacggctgtgggacgtggccacgggacgtccgatcggtgacccgctcaccggacac
agcgatgcggtgactgccgtggcgttccggccagacggccacctactcgcctcgggcagt
gccgattacagcgtgcggctgtggcagccgatctgggagacggggacggcgtgtgagctc
gcggagccgtacgtgaccaaagcccaagtgatttcctacatgccgccaggtcgcgttccg
gcgtgtccctaccggctttga

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