Mycobacterium sp. JS623: Mycsm_06850
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Entry
Mycsm_06850 CDS
T02423
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
msa
Mycobacterium sp. JS623
Pathway
msa00900
Terpenoid backbone biosynthesis
msa01100
Metabolic pathways
msa01110
Biosynthesis of secondary metabolites
Module
msa_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
msa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Mycsm_06850
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
msa01006
]
Mycsm_06850
Enzymes [BR:
msa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Mycsm_06850
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Mycsm_06850
2.5.1.29 geranylgeranyl diphosphate synthase
Mycsm_06850
Prenyltransferases [BR:
msa01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Mycsm_06850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF5919
TorS_sensor_domain
Rhamno_transf
Motif
Other DBs
NCBI-ProteinID:
AGB26954
UniProt:
L0J6R0
LinkDB
All DBs
Position
pMYCSM01:366627..367679
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AA seq
350 aa
AA seq
DB search
MTDIADPSDLVVGVDNRLREIAKLVRRSMLDAMPDGEPSQWLYALMREYPSRPGKALRPA
LCLSAGRAFGASSDDLLGLAVAIELLHNAFLVHDDVADGSEMRRGRPTLAAQYGTAAAVN
AGDGLAVVAGQVLRRATHRLNRELAELVWAEFDTMALRTLEGQATEIGWQLDNVDKLRPE
DYLNLIMHKTCWYTTIHPLRVGAIVGSAGTADLRPLVRFGFHFGAAFQIRDDLLNLVGDE
QMYGKEILGDLYEGKRTLPLMHLLSVAQNDDLAVVRDYLARTRSERSPEMVRGVRALMDT
YDSIAFTREYAEGILLVAEEYFEQAFADATPGPDLDFLRALVPFVWARWR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacatcgctgacccatccgacttggtggtcggcgtggacaatcgactccgtgag
atcgccaagctcgttcgccggtcgatgctcgacgcgatgcccgacggcgaaccaagccaa
tggctctatgccctgatgcgggaatacccctcgcgaccgggaaaggcgttgcggcctgcg
ctgtgtttgtccgctggccgcgccttcggtgccagcagtgacgatctactcggcctcgcc
gttgccattgagctgctgcacaacgcgtttctcgttcacgacgacgtcgccgacggaagc
gaaatgcgccgaggcagacccactttggctgcccagtatggcacggcggctgcggtcaac
gctggcgacggactcgcggtggtggcaggacaggtgctgcgccgggcgacgcaccggctg
aatcgtgaactcgctgagctggtctgggcggagttcgacaccatggcgttgcggacgctg
gagggccaggccaccgagatcggttggcaactcgacaatgtggacaagctgagacccgaa
gactatttgaatctgatcatgcacaagacgtgctggtacaccaccatccacccacttcgt
gtcggcgcgatcgtcggttccgcgggcacggcggatctgcgtccattggtgcgcttcggg
tttcatttcggcgccgcgttccagatacgcgacgacttgctcaatcttgttggcgacgaa
caaatgtatggcaaggaaatcttgggcgatctgtacgaaggcaaacgcaccctgccactc
atgcacttgctgagcgtcgcgcagaacgatgacctcgctgtcgttcgtgattatctcgcc
cgcacgcggtccgagcgttcacccgagatggttcgcggtgttcgcgcgctgatggatact
tacgacagcattgcgtttacccgcgagtacgccgaaggaatactgctggtcgccgaggag
tacttcgagcaagccttcgccgacgcaacgccggggccggatctggattttctgcgcgcc
cttgtgccctttgtgtgggcccggtggcgatga
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