Mycobacterium sp. JS623: Mycsm_06916
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Entry
Mycsm_06916 CDS
T02423
Name
(GenBank) DNA polymerase III epsilon subunit-like 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
msa
Mycobacterium sp. JS623
Pathway
msa03030
DNA replication
msa03430
Mismatch repair
msa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mycsm_06916
03430 Mismatch repair
Mycsm_06916
03440 Homologous recombination
Mycsm_06916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msa03032
]
Mycsm_06916
03400 DNA repair and recombination proteins [BR:
msa03400
]
Mycsm_06916
Enzymes [BR:
msa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mycsm_06916
DNA replication proteins [BR:
msa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mycsm_06916
DNA repair and recombination proteins [BR:
msa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mycsm_06916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AGB27019
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All DBs
Position
pMYCSM02:complement(30377..30964)
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AA seq
195 aa
AA seq
DB search
MNINRGLVVIDVETSGFDPASARILSVAALTLSPTCVVEHSTYTLLDPGVDPGPTHVHGL
TAAMLAGQPRYADVAARLASLMNGRILVAHNAAFDYGFLAAESHRCGATLPVAEVLCSLE
LAGLLDLGLDSLSLASLAAYWNVPQARPHDALDDARVLAAILPSALRRAAARRMKLPIRH
PSTLPLPLPRYPACA
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaaccggggcttggttgtcatcgacgtcgagacttcgggctttgatcccgcc
agcgcacgcatactcagcgtggccgccctgacactcagtccaacgtgcgtcgtcgagcat
tcgacgtacacgctgctcgatcccggggtcgatcctggcccgacgcatgtacacggcctg
accgcggccatgctggctggtcagccgcgatacgccgacgttgccgcccggctcgcgtcg
ttgatgaacggtcgcatcctggtcgcccacaatgccgcgttcgactacgggttcttggcc
gcagaaagccaccgctgcggtgccacgttgcccgtcgctgaggtgctatgcagcctcgaa
ctcgccggcctgctcgacctcggactcgacagcctcagcctcgcttccctggccgcctac
tggaacgtcccgcaggcccgtccgcacgacgcgctcgacgacgcccgcgttctggctgcg
atcctgccgtcagcactcaggcgcgccgctgcgcggcggatgaagttgcccatccgccac
ccatcgacgttgccactgccgctaccgcggtatccggcttgcgcgtga
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