Marivirga salinarum: QYS49_12460
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Entry
QYS49_12460 CDS
T10279
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
msaa Marivirga salinarum
Pathway
msaa03030
DNA replication
msaa03410
Base excision repair
msaa03420
Nucleotide excision repair
msaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QYS49_12460 (polA)
03410 Base excision repair
QYS49_12460 (polA)
03420 Nucleotide excision repair
QYS49_12460 (polA)
03440 Homologous recombination
QYS49_12460 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msaa03032
]
QYS49_12460 (polA)
03400 DNA repair and recombination proteins [BR:
msaa03400
]
QYS49_12460 (polA)
Enzymes [BR:
msaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QYS49_12460 (polA)
DNA replication proteins [BR:
msaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QYS49_12460 (polA)
DNA repair and recombination proteins [BR:
msaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QYS49_12460 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QYS49_12460 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
RNase_H_2
SpaO_N
HHH_5
WHD_BrxR
TOR1A_C
DUF6324
Motif
Other DBs
NCBI-ProteinID:
WMN11685
UniProt:
A0AA51REH0
LinkDB
All DBs
Position
4213451..4216261
Genome browser
AA seq
936 aa
AA seq
DB search
MSNTPESDKKLFLLDAMALIYRAHFAFSKTPRINSKGMNTGAALGFTNSLLEILKKEKPT
HIGVAFDTSTPTFRHVEFPAYKAQRDEQPEDIRVAIPYVKKIVEAFNIPVLIMDGYEADD
IIGTIARQAGEEGYKVYMMTPDKDFAQLVTDNVFLYKPAFMGNAVDILGIEEVKKKFDID
RVEQVIDILGLQGDAADNIPGIPGVGAKSAIKFLKQYGSVEGLLEHTDELKGKMKEKVEA
NKEQALLSKKLATIKVDVPLAYEPDKLVLDEPNEEVLRELFEELEFRTIMKRVLGEEPAA
PSKSSAKVDPAQMSMFTDTPEEGAEKDEEPEERRTLANTKHQYHLIDTPELREDLLTYLS
IQDEFCFDTETTDLEPTDAELVGLAFSYVAGEAYYVPFPADQKEAQKIADEFKEVLENED
ITKIGQNLKYDIQVMRNYGVRVKGKMFDTMLAHYLLDPETRHNMDVMAENYLNYSPVSIT
DLIGKKGVKQGNMRDVPVEDVVEYAGEDADITLQLKHLLEKEIKENNLEKLLHEVEEPLS
YVLAEMEYEGVKIDKDALAKMSKELETAALEAQEKIFELAGQEFNIASPKQLGEILFDKM
KLVDKPKKTKTGQYATGEEILSKLANEHEIADKILEFREYQKLKSTYVDALPKLISKKDG
RVHTDYRQAVAATGRLSSNNPNLQNIPIRTEKGRLIRKAFVPRDENYQLMAADYSQIELR
IMAAFSQDEAMMEAFKNGRDIHATTAAKVFGVELEDVDPGMRRKAKEVNFGIIYGISAFG
LAQNLNISRTEASDIIKAYFKEFPKVHDYMEKIKEEARANEYVTTILGRKRWLRDINSRN
QTIRGYAERNAINAPIQGSAADMIKIAMINIHIWMEKENLKSKMIMQVHDELIFDAHKDE
IDKLKDKVVDLMKNAMELDVPMEIGVGIADNWSEAH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatacaccagaatcagataaaaaattatttcttctcgatgcaatggcacttatc
taccgtgcacattttgcttttagtaaaacccctagaatcaactctaaaggaatgaatact
ggtgcggcattaggttttaccaatagtctcttggaaatattgaaaaaggagaaaccaacc
catattggtgtagcttttgacacatctactccaacttttcgtcatgtggaatttcctgcc
tataaagcacaaagagacgagcaacctgaggatattagagttgccataccttatgtaaaa
aagattgtggaggcatttaatattcccgtgctcatcatggatggttatgaagcggatgat
attatagggacgattgccaggcaagccggggaagaaggatacaaagtttatatgatgaca
ccagacaaggattttgcccaattggttacagataatgtattcctctacaaacctgctttt
atgggcaatgcagtagatattttgggtattgaagaagttaaaaagaaatttgatatcgat
cgagttgagcaagtaattgatattttgggattgcaaggtgatgctgcagataatattccc
ggaataccaggagttggtgcgaagtccgccatcaaattcctaaagcaatatggttcagtg
gaaggattattggaacatactgatgagctaaaaggaaagatgaaggaaaaagtggaagct
aataaagagcaggcactactttccaagaaattggctaccattaaagtagatgtccctttg
gcttacgagcctgataaattggttttggatgaacctaatgaagaagtcttaagagaatta
tttgaggaactagagttcagaaccatcatgaaaagggttttaggtgaagaaccagctgca
ccttcgaaatcttcagctaaagttgatcctgcacaaatgtctatgtttacggacacacca
gaagaaggggcagaaaaggatgaagaaccagaagaaagaaggaccttagcgaataccaag
caccaatatcatttaattgacactccagagcttagagaagatctcctaacctatctatct
attcaggatgaattttgttttgatacagaaaccactgatttggaaccaaccgatgccgaa
ttagtaggacttgccttttcttatgttgcaggtgaagcttattatgttccctttccagcc
gatcaaaaggaagcacaaaagattgcagatgaattcaaggaggttttggaaaatgaggac
atcactaaaattggtcaaaacctgaaatatgatattcaggtgatgcggaattatggcgta
agggtaaaaggaaagatgtttgacactatgttggctcattatctgcttgatccagaaact
cgtcacaatatggatgtgatggcagagaattatttgaattacagccctgtatctattacg
gatttgataggtaaaaaaggagtaaaacaaggaaatatgcgtgatgttcctgttgaagat
gtagtggaatacgctggagaggatgcagatattactttgcagctcaagcaccttttagaa
aaggaaattaaagaaaataatcttgaaaaacttttacatgaagtggaagagccgctgtcc
tatgttttggcagaaatggaatatgaaggcgttaaaatagataaagatgctctagctaaa
atgtcaaaggaattggaaactgctgctttggaagctcaagagaaaatttttgaattagct
ggacaagaatttaacattgcctcaccaaaacaattgggcgagattctttttgataaaatg
aaattggtggacaaaccaaagaaaaccaaaacgggtcaatatgccactggagaggaaatt
ttatccaaactagcaaatgaacatgaaattgcggataaaattttagaattccgcgagtat
cagaaattgaaatcaacttatgtggatgccttaccgaaattgatcagtaaaaaagatgga
agagtgcatactgattatcgtcaagcagttgccgccacaggtcgattaagctccaataat
ccgaacttgcaaaacattccaattagaactgaaaagggcaggttgatcagaaaggccttt
gtacccagagatgaaaattaccagctcatggctgcggattattctcaaattgaattgcgt
attatggcagcattctcacaagatgaagctatgatggaagccttcaaaaatggtcgtgat
attcacgctaccactgctgctaaagtgtttggcgttgaattagaagatgtcgatcctgga
atgagaagaaaagctaaagaggtgaactttggtattatttatggaatatctgcattcgga
ttggcgcaaaaccttaacatttcaagaactgaagcttccgatatcataaaagcttatttc
aaggaatttcctaaagtccacgactatatggaaaaaataaaagaagaagctcgagctaat
gaatacgtgactaccattttaggcagaaaaagatggttaagagatattaattcccgaaac
caaaccatcagaggttatgccgaacgaaatgccatcaatgctcctattcagggaagtgct
gctgatatgataaaaattgccatgatcaatattcacatatggatggaaaaagagaattta
aaatccaaaatgattatgcaggtgcatgatgaattgattttcgatgctcacaaagatgaa
atcgataagttaaaagataaagtagtggatttaatgaagaatgccatggaattggatgtt
cccatggaaatcggggtgggtatagccgataattggagtgaggcgcattaa
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