Marivirga salinarum: QYS49_17670
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Entry
QYS49_17670 CDS
T10279
Name
(GenBank) 3'-5' exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msaa Marivirga salinarum
Pathway
msaa03420
Nucleotide excision repair
msaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QYS49_17670
03430 Mismatch repair
QYS49_17670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msaa03400
]
QYS49_17670
Enzymes [BR:
msaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QYS49_17670
DNA repair and recombination proteins [BR:
msaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QYS49_17670
MMR (mismatch excision repair)
Other MMR factors
QYS49_17670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
ResIII
DUF3553
AAA_11
DEAD
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
WMN11313
UniProt:
A0AA51RC60
LinkDB
All DBs
Position
complement(3507741..3510011)
Genome browser
AA seq
756 aa
AA seq
DB search
MDYLSHLNPPQREGVENLEGPTMIIAGAGSGKTRVLTYRIAHLITVKNVDPFSILALTFT
NKAAKEMRERIEKIVGTDARNLWMGTFHSVFARILRAEADKLGYPSNFTIYDTEDSKSLI
RAIVREMGLDDKVYKQNVVYSRISGAKNNLVSWQNYMNNSVYVSEDEQAQKPKMGAIYKE
YVQRCFRSGAMDFDDLLFNTNVLFRDHLDVLNKYQQRFKYVMIDEFQDTNISQYLITKRL
SSVHQNICVVGDDAQSIYAFRGANIQNILNFEKDYPDLRVIKLEQNYRSTQNIVNAANSV
ILKNAAQLKKNVWTQNDDGELVHLIKSTSDNEEGRLVASSIFEDKNNKKLENKDFAILYR
TNSQSRAMEEALRKSSIPYRIYGGLSFYQRKEIKDLLAYLRFTINHNDEQSFRRIINLPK
RGIGASSVDKIVVSAFENDLGIWDVLQKSQRVLPNRAANAVDNFVTLIKSFKIRIERADA
YDTAAFIAKQSGLLKELYDDKTIEGLNRYENVQELLNAIKEFVDDEQQEDKSLEAFIADV
ALLTDADNEDQDNNDHVNLMTIHSAKGLEFKHVFIVGMEEDLFPSQMMLNSRADLEEERR
LFYVALTRAMEKVTLSYALTRYRFGRLKNCEPSRFIEEIDPAYIKVDRKFNRSEPMGNLN
NGSGSSVYAKNLVAQRKTERKAVPPGKKLHTPSPDFAPSDTRTLDTGMKVEHPKFGFGEV
KKMDVQGANRKATIEFENFGEKTLLLTFAKLRIMED
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggattatttaagtcatttgaatcccccgcagagagaaggagttgagaatttggaaggc
cccaccatgattattgctggtgctggttctgggaaaacacgggtgttaacctaccgtatt
gctcatctgattaccgttaaaaatgtggatccctttagcattttggctttaacttttacc
aataaggcagctaaagaaatgcgggaaagaattgaaaagatagtgggaactgatgcccgt
aatttatggatgggaactttccactctgtctttgctagaattttgagagcagaagccgat
aaattaggctatcctagcaatttcaccatttatgataccgaagattccaaatctctgatt
agagcaatcgtaagggaaatgggattggatgataaagtctataagcaaaatgtagtttat
agtagaatctctggagctaagaacaatctggtttcctggcagaattacatgaacaattca
gtttatgtttctgaggatgagcaagctcaaaaacctaaaatgggtgccatctacaaagaa
tacgtacaacgttgtttccgatctggcgctatggattttgatgatttattgtttaatacc
aatgttttattccgcgatcatctcgatgtactgaacaaatatcagcaacgatttaaatat
gtgatgatagatgagtttcaggatactaatatttcccagtacctgattacgaaaagactt
tcatctgtccatcaaaatatctgcgtagtaggggatgatgcgcaaagtatttacgccttc
cgcggagctaacattcaaaacatcctgaattttgaaaaagattatcctgatttgagggta
atcaaattagagcagaattatagaagtacacagaatattgtaaacgcggctaattcagtc
atcctaaaaaatgcagctcagcttaaaaaaaatgtctggacgcaaaatgatgatggcgag
ttggtccatttgataaaatccacttccgataatgaagagggtaggctagtggcttcttca
atttttgaggataaaaacaacaaaaagctagagaataaagattttgctatcctttataga
actaacagtcagtccagggctatggaggaggccttaagaaaaagtagcattccttataga
atttacggtggcttatctttctaccaaagaaaagaaatcaaggatttattggcctacctc
cgatttaccatcaaccataacgatgagcaatctttcagaaggatcatcaatttacccaaa
agaggaattggggcttcttcggttgataaaatagtggtttccgcttttgaaaatgatttg
ggaatttgggatgtgttgcaaaagagccagagagtgctcccaaaccgagctgccaatgca
gtggataattttgtcacgctgattaaatctttcaaaatcagaatagagcgagcggatgct
tatgatactgcagcctttatcgctaagcaaagtggcttgcttaaggaattatatgacgat
aaaaccatagagggattaaaccgctacgagaacgttcaggaattgctcaatgccattaag
gagtttgtggatgacgagcagcaggaagataaatcactggaagcttttatagctgatgtg
gctttactgaccgatgcggataatgaagatcaagataataatgatcatgtgaatttgatg
actattcactctgcaaagggattagaatttaaacatgttttcattgtggggatggaggag
gatttattcccttctcagatgatgctcaacagccgagctgacttggaagaagaacgaagg
ttgttttatgtagctttaactcgtgcaatggaaaaagtcactttaagctatgctttaacc
cgctaccgttttggtagattgaaaaactgtgagcctagccgatttatagaagagattgat
ccagcttatataaaagtagatagaaagtttaatcgctctgaaccaatgggcaatttgaat
aatggaagtgggagtagtgtgtatgccaagaacttggtagctcaaaggaagactgaaaga
aaagcagtgcctcctggcaaaaaactacatacaccctctcctgattttgcacctagcgat
actcgcactttagatacaggaatgaaagtagaacatccaaaatttggctttggagaggta
aagaaaatggatgtacaaggagccaatagaaaagcgactattgaattcgagaatttcggt
gagaagacacttttactgacttttgctaagttgaggataatggaggattga
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