Marivirga salinarum: QYS49_26660
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Entry
QYS49_26660 CDS
T10279
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
msaa Marivirga salinarum
Pathway
msaa00541
Biosynthesis of various nucleotide sugars
msaa01100
Metabolic pathways
msaa01250
Biosynthesis of nucleotide sugars
Module
msaa_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
msaa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QYS49_26660 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
msaa01005
]
QYS49_26660 (rfaD)
Enzymes [BR:
msaa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
QYS49_26660 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
msaa01005
]
Core region
QYS49_26660 (rfaD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
WMN13068
UniProt:
A0AA51RDF3
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All DBs
Position
complement(2231757..2232710)
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AA seq
317 aa
AA seq
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MIIVTGAAGFIASNLIKKLNSEGFNHIIAVDKFDNAEKNKNLEGLKIQEKIEREVFFEWL
DKQNEKEIEFIFHLGARTDTTEFDLAILTKLNTDYTKEVWKRCIDMQIPLIYASSAATYG
LGELGYDDDESKIPELKPLNPYGISKNEFDKWALKQDKKPFYWAGLKFFNVYGPREYHKG
RMASVILHAYKQISETGKMKLFRSHNPEFKDGEQMRDFVFVDDVVNVMVWLMHHRKNSGI
YNLGSGKARTFLDLVKAVFKSMNKQEDISFIDTPADIRDKYQYFTEAKMEKLKTIGYPYQ
FTDLESGVDAYIKEMKL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgataatagttaccggagccgctggatttatcgcatcaaacctcatcaaaaaactcaat
tctgagggttttaaccacattattgcggttgacaaatttgataatgctgaaaaaaataaa
aatctggaaggcttaaaaattcaagaaaaaatcgaaagggaagtgttttttgaatggcta
gataaacaaaatgaaaaagaaattgaatttatctttcatttaggtgctagaacagatact
acagaatttgatttagctatactgactaaactcaataccgattacactaaagaagtttgg
aaaagatgtatcgatatgcaaattccattaatttatgctagctctgcagctacttatgga
cttggggaactaggttatgacgatgatgaaagcaaaatccctgaattaaaaccccttaat
ccttacggtatttcaaaaaatgaatttgataaatgggcgcttaagcaagataaaaaacca
ttttactgggcaggattaaagtttttcaatgtttatggcccaagggaatatcataaaggc
agaatggccagtgtgattttacatgcttacaagcaaatttctgaaacgggtaaaatgaaa
ttattccgttctcataatcctgaatttaaggatggggagcaaatgagagactttgttttt
gtagatgatgtggtgaatgtgatggtttggttaatgcatcaccgaaaaaattccggaatc
tacaatctgggtagtggaaaagctcgtactttcttagacttagtgaaagccgtttttaaa
tccatgaataaacaagaagacatcagttttattgatactcctgctgatattcgtgataaa
tatcaatatttcacagaggcaaaaatggaaaaattaaaaacaattggctacccttatcaa
tttactgatttggaaagtggtgtagatgcttatatcaaagaaatgaaactataa
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