Marivirga salinarum: QYS49_28475
Help
Entry
QYS49_28475 CDS
T10279
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
msaa Marivirga salinarum
Pathway
msaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QYS49_28475 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msaa03019
]
QYS49_28475 (recQ)
03400 DNA repair and recombination proteins [BR:
msaa03400
]
QYS49_28475 (recQ)
Enzymes [BR:
msaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QYS49_28475 (recQ)
Messenger RNA biogenesis [BR:
msaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QYS49_28475 (recQ)
DNA repair and recombination proteins [BR:
msaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QYS49_28475 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ-1-like_HTH
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
WMN12936
UniProt:
A0AA51NCL5
LinkDB
All DBs
Position
complement(1981443..1983620)
Genome browser
AA seq
725 aa
AA seq
DB search
MIEEQEATLKEKLKEVFGYNQFRGNQELIMQNLINGKNTFVIMPTGAGKSLCYQLPALSQ
EGTALVVSPLIALMKNQVDTLVALGVNAAFLNSTLTKTETKRVKKEVMSGNLKLLYVAPE
SLTKEENVEFLKQANISFAAIDEAHCISEWGHDFRPEYRRIKSILEQISNIPIIALTATA
TPKVQLDIQKNLNMEEANVFKSSFNRENLYYEVRPKNQAKKQLIRFLNERKGKCGVIYCL
SRKKVEEIAEFLNVNGFNAAPYHAGLESATRMKNQDDFLNEDTDIIVATIAFGMGIDKPD
VRFVIHYDTPKSVEGYYQETGRAGRDGLVGDCLMFYSYNDILKLEKFNKDKPVTEKENAK
LLLEEMSSYAESSVCRRKQLLHYFGEEFADYCGKCDNCKHPKEKFDAKDEMITVLKTVKL
TNQRFGINHLVNVIRGSKDQYVTSYDHNKLEVHGVGADQDVEFWKSVIRQTMLYGYLKKD
IENIGVLKINKAGEDFLKKPTDIQFTVNHVYTDDGDEDHIEKDTVSANAFDETLYTQLKA
LRKKVAKSKNLPPYVIFQDPSLEEMATTYPTTNEEMAAVNGVGLGKVRKFGKPFMELIKE
YVEENDIITAADVMVKSSVNKSKMKIFIIQQVDKKMDLEEIAEMKDISFEELIDEIEHIC
YSGTTLNLNYYLNQIIDDDKQEEIMEYFLTAESDSIDDAMDEFDEEFSEEDLRLMRIKFL
STYAN
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagagcaagaagctactttaaaagaaaaattaaaagaggtatttggatataat
caatttaggggaaaccaagaattgattatgcagaacctaataaatggtaagaataccttt
gtgatcatgccaactggagcaggaaaatcactttgctaccaattacctgcactttcgcaa
gaaggaacagccttggttgtatctcctttgattgcattaatgaaaaatcaggtagacact
ttggttgcattaggtgttaatgccgcatttttaaattcaacattaaccaaaacagaaacc
aaaagagtgaaaaaagaagtcatgagtggaaacttgaaacttctttatgttgctccggaa
tctctgactaaggaggaaaatgttgagtttttaaaacaagccaatatttcttttgcagca
atagatgaagcgcattgtatttcagaatggggacatgatttccgaccagaatacagaaga
ataaaatccatattagagcaaatttctaatattcctattattgcccttacggcaacagcc
acgcctaaagtgcaattggatattcagaaaaacttgaatatggaagaggccaatgttttt
aaatcttcttttaatagggaaaatttgtattatgaggttaggccaaaaaatcaagccaaa
aaacaactcattcgattcttaaatgaaagaaaagggaaatgtggtgtaatatattgtttg
agccgaaaaaaggttgaagaaattgctgaatttctgaatgtaaatggattcaatgctgct
ccataccatgctggcttagaaagtgctactcgtatgaaaaatcaggatgatttcttaaac
gaggatactgatataattgtagcgaccatagcctttggtatgggaatcgataaacctgat
gttcgctttgtgattcattatgacactccaaaatcagtggaaggttactaccaagaaact
ggtagagctggaagagatggcctggtaggtgattgtctaatgttttacagctataatgac
attcttaagcttgagaaatttaataaggataagcctgtaacagaaaaggaaaatgccaag
ctgcttttggaagaaatgtcttcctatgcagaatcatctgtttgcagaagaaaacaattg
cttcactattttggggaagaatttgccgattactgtggaaaatgtgataactgtaagcat
ccaaaagaaaagtttgacgcaaaagatgaaatgattacggttctgaaaaccgtaaaatta
accaatcaacgatttggcatcaatcacttagtaaatgtaattcgtggttctaaagaccaa
tacgtaaccagttatgaccacaacaaactagaagtacatggtgtgggggctgatcaagat
gttgagttttggaaatctgtcatcagacaaaccatgctttacggatatttaaaaaaagac
attgaaaatattggtgtactgaaaatcaataaagcaggagaagatttcttaaagaaacca
actgatattcaatttactgttaatcacgtttatacggatgatggtgatgaagatcatatt
gaaaaagatactgtttcagccaacgcattcgatgaaactttatacactcagcttaaggcg
ttaagaaaaaaggttgcgaaatcgaaaaaccttcctccttatgtgattttccaagatcct
tctttagaggaaatggctactacctaccctacgactaacgaggaaatggcagcagtgaat
ggtgtgggcttaggaaaggttcggaaatttggtaagccttttatggagctaattaaggaa
tatgttgaggaaaatgacattattactgctgctgatgtaatggtaaaatcatccgtcaac
aaatccaaaatgaaaattttcattattcagcaagtggataagaaaatggacttagaggaa
atagcagaaatgaaagatatctcttttgaggagttgatagatgaaatagaacatatttgc
tactcaggcaccactttaaatttaaattattacctaaatcagatcattgatgatgataag
caggaggaaataatggaatattttcttacggcagaatcagacagcatagatgacgcgatg
gatgaatttgatgaagaattcagtgaagaagatttaaggttgatgcgtattaagttttta
tccacttatgcaaactaa
DBGET
integrated database retrieval system
