Marivirga salinarum: QYS49_35065
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Entry
QYS49_35065 CDS
T10279
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
msaa Marivirga salinarum
Pathway
msaa03030
DNA replication
msaa03430
Mismatch repair
msaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QYS49_35065 (dnaE)
03430 Mismatch repair
QYS49_35065 (dnaE)
03440 Homologous recombination
QYS49_35065 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msaa03032
]
QYS49_35065 (dnaE)
03400 DNA repair and recombination proteins [BR:
msaa03400
]
QYS49_35065 (dnaE)
Enzymes [BR:
msaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QYS49_35065 (dnaE)
DNA replication proteins [BR:
msaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QYS49_35065 (dnaE)
DNA repair and recombination proteins [BR:
msaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QYS49_35065 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
T2SSK
MCM10_OB
Intimin_C
DNA_pol_A_exo1
HHH_3
DUF6282
Motif
Other DBs
NCBI-ProteinID:
WMN12942
UniProt:
A0AA51ND01
LinkDB
All DBs
Position
1991852..1996153
Genome browser
AA seq
1433 aa
AA seq
DB search
MYLIYDTETTGLPKNYNAPLSDADNWPRCVQIAWQLHGANGELLDAQNHIIKPEGFDIPY
NAEKVHGISTERAQKEGKLLIEVLEAFEMVLEKTDVVVGHNISFDVSIMGAEMLRKELSE
LVLTEKPIIDTKEAGTDFCKIPGGRGGKFKWPTLTELHKKLFGQDFADAHDAAYDVDATA
KCFFGLINEKAVKPLGETPIEAINYEPPKLDAANFAASSKNEEKAASDALKQAKNADISE
LSDTNFVHLHCHTQFSILQSTSEIPSMVNKAKELGMPAIAMTDHGNMMGAYNFVRDANKA
GIKPIVGCEYFLTQDRTNKKNKDDGFQTVLLAKNKAGYHNLAKLSSIAFVEGFYYVPRID
KEALIQYKDNIIATTGGLWGEVPFLILNAGESQAEEAFVWWKEQFGEDFYIELNQHGIPE
EQKVNEVLLKFAKKYDVKYFAANNTYYTNKEDAEAQDILLCVKDGETTGEHGKPKKYVGK
RGREYRFGLPNDEFYIKSQDEMKKLFVDYPEAIACTAEIADKIEGFELARDVLLPKYDIP
QEFIDPKDAEDGGNRGENAYLKHITYEGAKKRYPEITDEIKERLDFELETIERTGYPGYF
LIVQDFTTAAREMGVSVGPGRGSAAGSAVAYCTAITNIDPIKYDLLFERFLNPDRVSLPD
IDIDFDDHGRQKVIDYVIKKYGANQVAQITTYGTMAAKSAIRDTARVMELPLMDADRIAK
LVPDIKLKALFDLASDKKKLSAKLKNNGEAISKAEELLNLAKADDASAKVINQARVLEGS
VRNTGIHACGVIITPDDITKFVPVALAKDSDMYCTQFDNAVVENAGLLKMDFLGLKTLTL
IKDAVRIVEERHGVKLDPDEFPIDDPKTYELFQKGETVGIFQYESAGMQKYLRDLKPTEF
SDLIAMNALYRPGPLEYIPNFVKRKNGLEEISYDLPEMEEYLKETYGITVYQEQVMLLSQ
KLAGFTKGEADVLRKAMGKKIFALLEELKPKFINQGAEKGHPKDVLEKIWKDWEAFAAYA
FNKSHSTCYAWVAYQTAYLKAHYPAEYMASVLSNNMGQITDVTFFMEECKRAEIEVLGPD
VNESNPGFTVNENGQIRFGLAAIKGAGSAAVESIIQERKANGQYKDIFDFAERIPLKSVN
KKTFESLAMAGGFDCFKEYHRKQFLVSDNGEGTLIEKIIKYAQKLQHEKDSAQTSLFGGE
GGVAIPPPRVAEMEPYSELEKLNIEKEVVGLFISGHPLDAYRFEMESFCNTQVSELNDIE
SLASKNEIKVGGIVTAVAHRQTKTGKPFGTLTLEDYGGSFTFFMFGDDYLANKQFYENGW
FIFISGRVGKKPWGDQALEFKISKVELLSELRDKRTKSLAIMLDLNAITEDLIVELDNLC
QTFKGECEVKLELQDKINGYKVETKSRKYKVNPSNELIEGLNRIPDLNYRILT
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatttacgataccgagaccaccggattaccaaaaaattacaacgccccatta
agtgatgcagacaattggccacgctgtgtgcagattgcttggcagctgcacggagccaat
ggtgagttattggatgcacaaaatcacatcatcaaacctgaaggttttgatattccctat
aatgccgaaaaagtgcatggtatttctaccgaaagagcccagaaagaaggtaaactgcta
attgaagttttagaagctttcgaaatggttctggagaaaaccgatgtggtggtcggacat
aatattagtttcgatgtttccataatgggagcggagatgttgagaaaagaactttctgaa
ttggttcttacggaaaaacccataatcgataccaaagaagcggggactgatttctgtaaa
atacctggtggaagaggaggaaagtttaagtggccaacgctaacagagcttcataaaaaa
cttttcggacaagattttgcagatgcacatgatgcagcttacgatgtggatgctactgca
aaatgtttctttggcttgattaatgaaaaagcagtaaagcccttgggtgaaactccaatc
gaagcgattaattatgagccgccaaaattagatgcagctaattttgctgcaagttcaaaa
aatgaagaaaaggcagcttctgatgcattaaagcaagctaaaaatgctgatatatcagaa
ttaagtgatactaattttgtgcatcttcattgccatacgcaattttccattttgcaatcg
acttcggaaattccctcaatggtcaataaggcaaaagaattaggtatgccagccatcgcc
atgacagatcacggcaatatgatgggtgcctataattttgtgcgtgacgcgaataaagcc
ggaataaaacccatcgtgggttgtgagtatttccttacgcaggatagaactaataagaaa
aataaggatgatggttttcaaactgttcttttagcaaaaaataaagcaggatatcataat
ttagctaagctttcttccatcgcctttgtggaaggcttttattatgtgcctcgaattgat
aaagaagcattaatccaatataaagataatatcattgccactactggtggattatgggga
gaagtcccatttttgattctaaatgctggggaaagccaggcggaagaagcttttgtttgg
tggaaagaacaatttggggaagatttttacattgaattaaaccaacacgggattcccgaa
gagcaaaaggtcaatgaagtattattaaaatttgccaaaaagtatgatgtaaaatatttc
gcagccaataatacgtactacaccaataaagaagatgctgaagcgcaagatattttactt
tgcgtgaaagatggtgaaacgactggagagcatggaaagcctaaaaaatatgtaggaaaa
agaggacgcgaatatcgttttggtttgccaaatgatgaattttacatcaagtctcaggac
gaaatgaagaagttgtttgttgattatccagaagccattgcgtgcacagctgagatagca
gacaaaattgaaggttttgaattagcaagggatgttctcttacctaaatatgatattcct
caagagtttattgatcctaaagatgctgaggatggtggaaacaggggggaaaatgcttat
ttaaaacatatcacttatgaaggagctaaaaagcgatatcctgaaataacagatgaaata
aaggaacgacttgattttgagttggaaactattgaaagaactggttatccaggttatttc
ttgattgtacaggattttaccacagccgccagagaaatgggcgtttcagttgggcctgga
aggggttcggcagcaggttcagcagtagcttactgtacagccattaccaatattgaccct
attaaatatgatttactattcgagcgtttcttgaatccagatagggtttcattacccgat
attgatattgattttgatgatcacggaaggcaaaaagtaattgattatgtgattaaaaag
tatggagctaatcaggtagcccaaatcaccacttatggtactatggcggctaaatcagcc
attcgagatacagcaagggtgatggagttgccgcttatggatgccgataggattgccaaa
ttggttcctgatattaagctcaaggccttatttgatttggcatctgataaaaagaagtta
tcagcaaaattgaagaataatggggaagcgattagcaaagcggaagaattattgaattta
gcaaaagcagatgatgcttctgcaaaagtaattaatcaagcaagagttctagaaggctcg
gttagaaacactgggattcatgcctgcggagtaattatcacccctgatgatattaccaaa
ttcgttccagttgcattggccaaggattcggatatgtactgcacgcagtttgataatgcg
gtggtagagaatgcaggtctcctgaaaatggatttcttgggtttgaagactttaacgctg
atcaaagatgctgtcagaattgtggaggaaagacatggtgttaaacttgatccagatgaa
tttccgatagatgacccaaaaacatatgagctgttccaaaaaggagaaacggttgggatt
ttccagtatgaatctgctggtatgcaaaaatatttgcgggatttaaagcctacagagttt
tcggatctgatcgcgatgaacgcactttaccgaccaggacctttagagtatattcccaat
ttcgtaaagcgtaaaaatggtctggaagaaatcagttatgaccttccggaaatggaggaa
tatctgaaggaaacttatggtatcactgtttaccaggagcaggtgatgttgctgtcacag
aaattagctggttttaccaaaggtgaagcggatgttttgcgtaaagcaatgggtaaaaaa
atctttgccctactggaagaactgaaacctaaatttattaatcaaggagctgaaaaaggg
catccaaaagatgtattagagaagatctggaaagattgggaagcctttgcagcctatgct
tttaataaatcacactcaacttgctatgcttgggtggcctatcaaacagcctatttaaaa
gcgcattatcctgctgagtacatggcttctgtgttgagcaataacatggggcaaatcacg
gatgtgactttctttatggaagaatgtaaacgtgcagaaatagaagttttagggccagat
gttaatgaatcaaatcctggctttacggtaaatgaaaatggtcaaatccgatttggattg
gcagctattaaaggagctggttctgctgcggtggaaagtattatccaagaacgtaaagct
aatggccaatacaaagatatatttgattttgcagaacgaattccattaaagagtgtcaat
aagaagacttttgaatcacttgcaatggctggtgggtttgattgttttaaagaatatcat
agaaagcaatttttggtttcagataatggagaaggtacattaattgaaaaaataattaaa
tacgctcaaaagctgcaacatgaaaaagatagtgcacaaacttccttatttggcggggaa
ggaggagtagccattccgcctccaagagttgctgaaatggaaccttattctgaattagaa
aaactaaatattgaaaaagaagtagtaggacttttcatttctggtcatccgttagatgct
tacagatttgaaatggagagcttttgcaacactcaagtttcggagttaaatgatattgaa
agtcttgcatctaaaaatgaaataaaggttggcggtattgtaactgctgttgcacataga
caaaccaaaacaggaaagcctttcggtactttaaccttggaagattatggcggttctttc
acattcttcatgtttggagatgattatttggcgaataagcaattttatgaaaatggttgg
ttcatttttatttccggaagagtagggaaaaaaccatggggagaccaagcattggaattc
aaaatcagcaaagtagagctgctttcggaattaagagacaaaagaaccaagagtttggct
attatgcttgatttaaatgccattacagaagatttgatagtagagcttgataatttatgc
caaacatttaaaggagaatgcgaagtgaaattggaactacaggacaaaatcaacggctac
aaagtagaaactaaatcaagaaaatataaagttaatcctagtaatgagttgatagagggt
ttgaatagaattcctgatttgaattataggattttgacttaa
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