Marivirga salinarum: QYS49_35410
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Entry
QYS49_35410 CDS
T10279
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
msaa Marivirga salinarum
Pathway
msaa03030
DNA replication
msaa03430
Mismatch repair
msaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QYS49_35410 (dnaE)
03430 Mismatch repair
QYS49_35410 (dnaE)
03440 Homologous recombination
QYS49_35410 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msaa03032
]
QYS49_35410 (dnaE)
03400 DNA repair and recombination proteins [BR:
msaa03400
]
QYS49_35410 (dnaE)
Enzymes [BR:
msaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QYS49_35410 (dnaE)
DNA replication proteins [BR:
msaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QYS49_35410 (dnaE)
DNA repair and recombination proteins [BR:
msaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QYS49_35410 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WMN13041
UniProt:
A0AA51NCT8
LinkDB
All DBs
Position
complement(2172537..2175488)
Genome browser
AA seq
983 aa
AA seq
DB search
MYINCHTHFSFKYGTLSPEELILECIENGIHKIALTDIHSTAAYIEVFRYLKNEYAHYPL
KVIPGIEFRKQEQLIYIGMARNNQGFEELNAFLSYHNRNDFPLQSRPRFTDNVAVIYLMH
TAPENLRTNEFIGIKPEELNRLRYQHHKFQKEKLLALAPVTFKNKTGFNMHRLLRAIQQN
QLLSRLDKKFQAQPNEFMQPKEMLQQHYQGFEFMLKQSDKLIEECHFEIQFGQSKNKRSL
LGSAIEDWHYFESEARKGFKNRYGKQNAVLTERFEREMEIIRQKDFTAYYLITYDMIQFA
QRKGFPHVGRGSGANSMIAYCLGITNVDPIDLDLYFERFLNPSRTSPPDFDIDFSWQHRD
AVIQYMFDKHNAHHTCLLGTHTTMKYRMMLREIAKVFGMPKSEIDKLSENPNYGKKDDYL
RKVLHYTQHMVAKEFPANISIHAGGLLITEQPIYAFTATEMPPKGFPVSHFDMYSAEDIG
IYKYDILSQRGLGHIQDTIKIVEENQGKKIDPRKIHTKILEKDPAIKNLIKNGNTMGCFY
VESPAMRMLLAKLECEDYLTLVAASSIIRPGVSQSGMMKTYIERHHSNGNYESIHPIMDK
LMKETYGVMVYQEDVIRVAHHFGGLTLSEADILRRGMSGKYRSRKEFEKVENQYFKNCRE
KGYDEKVIQRVWFEISSFSGFSFAKGHSASFAVESYESLYLKAHYPIEFMVGVINNFGGF
YKTEFYIHEARKAGAEIVTPCINKSHYLTRIEGKRIYLGFIHIKDLERKVAERIVIEREN
HGSFKSIEDFKVRIPIKKEQLFILIKIGAFNSFNKPNKHLLWKAYSLYLKKKEKNNINLF
EEEPVNYSLPKMETTALEKSFNELMILGYPTCNPYILINSQIKPDTYATELRNKINKKVH
LIGYMVTIKRTSTKNKESMYFGTFHDSYENTFDTVHFPKISEEYPFRGKGFYSLVGKVVL
DYNYPMLEVEYMEKQGWLNPDYL
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgtatattaattgtcacacacacttcagcttcaaatacggtactttatcgcccgaagaa
ctgatattagaatgcattgaaaatggtattcataaaattgcattgactgatatccatagt
acagctgcctatatcgaagtttttcgttatttgaaaaatgaatatgctcactatccacta
aaagtaatccctggaattgaatttcgtaaacaagaacaattaatctatataggcatggcc
cggaacaatcaaggcttcgaagaactcaatgcctttttatcttaccacaaccgaaatgat
tttcccttgcaaagcagacctcggtttactgataatgttgctgttatttaccttatgcat
actgctcctgaaaatctgcgcaccaacgaattcattggaataaaacctgaagaactcaac
cgcttgaggtatcagcatcataaatttcaaaaagaaaaattattggctttagctcctgtt
accttcaaaaacaaaacaggttttaatatgcatcgcctattacgagcgattcagcaaaac
caattacttagtcgtttggataaaaaatttcaggcacaacccaatgaattcatgcaacct
aaagaaatgctccaacagcattatcaaggttttgaatttatgctaaagcaatcagataaa
ctaatagaagaatgtcattttgaaattcaatttggacaatctaaaaataaacgctcttta
ttgggttctgccatagaagattggcactattttgaatctgaagctagaaaaggctttaaa
aatcgatacggaaaacaaaatgcagtgcttaccgaacgatttgaaagagaaatggaaatc
ataaggcaaaaggatttcactgcttattatcttatcacttatgatatgatacaatttgct
caaagaaaagggtttcctcatgtagggcgtggtagtggcgctaatagtatgatagcttat
tgtctcggtataaccaatgtagaccccattgatcttgatctctatttcgagcgctttcta
aatccttcacgcacctcacccccagattttgacatcgacttctcttggcaacatagagat
gctgtaattcaatatatgtttgataaacataatgcacatcacacttgccttctaggcact
catactactatgaaataccggatgatgctacgtgaaatagctaaagtatttggtatgccg
aaaagtgaaattgataaactgtctgaaaatcccaactacggaaagaaagatgattacttg
cgcaaggtattgcactatacccaacacatggtagccaaagaatttccagccaatatttcg
attcatgcaggcggattattaatcaccgaacaacccatttatgcatttacagcaacagaa
atgccaccaaagggctttcctgtttcccattttgatatgtatagtgcagaagatatcggt
atttacaaatatgacatcctaagtcaaagaggtcttgggcatattcaagataccattaaa
atagtagaagaaaatcaaggcaaaaaaatagatccccgtaaaattcatacaaaaatactg
gaaaaagatcccgccattaagaatctaatcaaaaacggaaatactatgggttgcttctat
gtggaatctcccgcaatgagaatgttgcttgcaaagctagaatgtgaagattatctcact
ttagtagcagccagttctattattcgccctggagtttcgcagtcaggcatgatgaaaact
tatatagagcgtcaccatagcaatgggaattatgaatcaatccatcccataatggataaa
ctcatgaaagaaacttatggtgtaatggtctatcaagaagatgttatccgtgtagcccat
cactttggtggactaactttaagtgaagcagatatattacgaagaggaatgtcaggtaaa
tataggtctcgtaaagaatttgaaaaagtagaaaatcagtattttaaaaattgtcgtgaa
aaaggatatgatgaaaaggtaattcaaagagtttggttcgagatatcaagtttctcaggt
ttttcttttgcaaaaggacattctgccagctttgcagtcgaaagctatgagagtttatac
cttaaagcacactacccaatagagtttatggtaggcgttatcaataatttcggaggattt
tacaaaaccgaattttatatccacgaagcgagaaaagcaggagcagaaattgtgactcct
tgcattaataaaagtcattacctcaccagaatagaaggaaagagaatttacttagggttt
attcatattaaagatctcgaaagaaaagtagctgaaagaattgtaattgaaagagaaaac
catgggtctttcaaaagtatcgaggactttaaagtaagaattcctatcaaaaaagagcaa
ctattcatcctgataaaaattggagcctttaacagcttcaataaacccaacaaacatctt
ttatggaaagcctattccctctacctcaaaaagaaagagaaaaataatataaatctattt
gaagaagagcctgtaaattacagccttccaaaaatggaaacaaccgctttagaaaagtca
tttaatgaattgatgatattgggctatcccacatgtaatccttacatactaattaatagt
caaatcaagcctgatacctatgctacagaattaagaaataaaataaataagaaagtacat
ctcatcggctatatggttactataaaaagaacctctacaaaaaacaaagaatcaatgtac
ttcggtacttttcatgacagttatgagaatactttcgacacagttcatttccccaaaatc
agcgaggaatatccttttagaggcaaaggtttctatagcctagtaggaaaagtggtgtta
gattataattacccgatgttagaagtggagtatatggaaaagcagggctggctcaaccct
gattatctgtag
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