Marivirga salinarum: QYS49_35470
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Entry
QYS49_35470 CDS
T10279
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msaa Marivirga salinarum
Brite
KEGG Orthology (KO) [BR:
msaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msaa03032
]
QYS49_35470 (topA)
03400 DNA repair and recombination proteins [BR:
msaa03400
]
QYS49_35470 (topA)
Enzymes [BR:
msaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QYS49_35470 (topA)
DNA replication proteins [BR:
msaa03032
]
Prokaryotic type
DNA Topoisomerases
QYS49_35470 (topA)
DNA repair and recombination proteins [BR:
msaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QYS49_35470 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
WMN13059
UniProt:
A0AA51NDM1
LinkDB
All DBs
Position
2213026..2215383
Genome browser
AA seq
785 aa
AA seq
DB search
MSKNLVIVESPAKAKTIEGYLGKDYKVLSSYGHVRDLPKGNNAIDIENGFKPTYEISKDK
KEVIKALIKEAKLAEMIYLATDDDREGEAISWHLKEALKLDDSRTKRIVFREITKSAIQN
AINSPKGIDIDLVNAQQARRILDRLVGFELSPILWKKIKTGLSAGRVQSVAVRIVVERER
EIEKFKAESFYKVQAFFNVEGKELKAELPGRFKTEEEAMAFLEKCLDAEFSIGKLEKKPA
KKTPAPPFTTSTLQQEASRKLGFSVSQTMTLAQRLYESGKISYMRTDSLNLSDEAREGAA
KEIKSEYGADYAHTRVFKTKSAGAQEAHEAIRPTNFATKEASSDYNEQRLYDLIWKRAIA
SQMSDAQIEKTNVSIDISNTDQTLSASGEVVKFEGFLKVYIESTDEEEEGETNVTKGMLP
PLQVGQTLDLKRMQSREGFTRPPARYNEATLVKKLEELGIGRPSTYAPTISTIQKRGYVN
KEFRDGKDRKYVEMVLENGKINRSEKTEITGAEKNKLYPSNLAMVVNDFLVEHFPNVTDY
NFTAKVEHEFDEIAKGEKVWNNMIQKFYGEFHQKVDEAENIERKDVNTGRELGVDPKTGK
KVIVRLGKFGPLVQLGETPDKEDEEAEKPKFASLRKGQFIENITLEDAMELFKLPRELGD
YEDQKMVAAIGRFGPYVRHDGKFVSIPKGEDPLDITADRAIELIEEKRKADREKFIKSFD
EDPDVQVLNGRWGPYIKFGKKNVKIPKDKEPTDLTYQECVELAEKTPDKKGGRKAAPKKK
ATKKK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatttagtgatagtggagtcaccagccaaagccaaaactattgaaggttat
cttggaaaggattataaagtgctttctagttatggtcacgttcgggatttgccaaaagga
aataatgccatcgacatcgaaaatgggtttaaacctacttacgaaatctcaaaagataag
aaagaagttattaaggctttgataaaggaagccaaattagcagaaatgatctatctcgcg
actgatgatgaccgcgagggagaagctatttcatggcatttgaaagaagctttaaaatta
gatgatagtagaaccaaaagaattgtttttagggaaatcacaaaatcagctattcaaaat
gcgattaattctcctaaaggaattgatatagatttagtaaatgcgcaacaagccagaagg
attttagatagattggtgggttttgagctttctccaatcctttggaaaaaaatcaaaacc
gggctttcggctggtagagtccaatcggttgcggttagaatagtagtggagagagagcga
gagattgaaaaatttaaagcggaatcattttataaagtacaagccttctttaatgtagag
ggtaaagaattaaaggcagaacttccgggcagattcaaaacggaagaagaagcgatggca
tttttagagaaatgtctggatgctgaattttcaataggaaaattagagaaaaagccggct
aagaaaactccagctccgccttttaccacttccactttgcagcaggaagcttcaagaaaa
ttaggtttctcagtttctcaaaccatgacattagcccagaggctttatgaatcaggtaaa
atctcatatatgagaaccgattccctgaatttgtcggatgaagcgagagaaggtgctgct
aaagaaattaagtctgagtatggggcagattatgcgcataccagagtttttaagacaaaa
tcagctggagcacaagaagctcacgaagccattcgtccaaccaattttgctacaaaagaa
gcaagcagtgactataacgaacaaaggctttatgatttaatttggaaaagagccattgct
tcccaaatgtcggatgcacaaattgaaaagaccaatgtaagtattgatatctctaataca
gatcagaccctaagtgctagtggtgaggttgtgaaatttgaagggttcttgaaagtttat
attgaatccactgatgaggaggaagaaggcgagaccaatgtaaccaaaggcatgttgcct
ccattacaagttggacaaactttggatttaaagagaatgcaatccagagaaggcttcacc
agaccacctgctcgctataatgaagcaactttagtgaaaaaattagaagaattgggaatt
ggacgaccatctacctatgctccaaccatttctactattcaaaaaagaggctatgtcaat
aaagaattccgagatggaaaagatcggaaatatgttgaaatggtcttggaaaatggaaaa
ataaaccgttcagagaaaactgaaattacaggagctgagaaaaataaattatacccaagc
aatttggctatggtggtaaatgatttcttggtggagcattttccaaatgttaccgattat
aatttcaccgctaaggtagagcatgaatttgatgaaattgccaaaggcgaaaaggtttgg
aataacatgatccaaaaattctatggcgaatttcaccaaaaagtggacgaggctgaaaac
attgaaagaaaagatgttaatacaggccgcgagttaggagttgatcctaaaactggcaag
aaagttattgtccggttagggaagtttggcccattagtacaattaggggaaactcctgac
aaagaggacgaagaagctgagaaaccaaagtttgcgagcttaagaaaagggcagtttatt
gaaaatatcacgctagaagatgccatggagttgttcaaattgcctagagaattgggtgat
tacgaagatcagaaaatggtggctgcaattggtcgttttggtccttatgttcgtcacgat
ggaaaatttgtaagcattccaaaaggagaggatccattggatatcacggctgatagggca
attgaattaattgaagaaaaacgaaaagcagatagagagaaattcatcaaaagtttcgat
gaagatcctgatgttcaggtgttgaatgggagatgggggccttacattaagtttggtaaa
aagaatgttaaaatccctaaagataaggaaccaacagatttgacttatcaagaatgtgtt
gagttagctgaaaaaactcctgacaaaaaaggaggaagaaaagcggctccaaagaagaaa
gcaacaaaaaagaaataa
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