Marivirga salinarum: QYS49_38255
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Entry
QYS49_38255 CDS
T10279
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
msaa Marivirga salinarum
Pathway
msaa03018
RNA degradation
Brite
Enzymes [BR:
msaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QYS49_38255
Messenger RNA biogenesis [BR:
msaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QYS49_38255
Ribosome biogenesis [BR:
msaa03009
]
Prokaryotic type
rRNA helicases
QYS49_38255
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WMN11402
UniProt:
A0AA51R8N5
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Position
3678494..3680287
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AA seq
597 aa
AA seq
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MLTFEELGLKPDILKAILEIGFLEPTPIQEKTIPHLLNTKQDLIALAQTGSGKTAAFGLP
VLNQIDGDSKKTQSLVLCPTRELAIQIANDFNSYTKYSKKLDVVPVYGGASIETQIKALN
KGAQIVVGTPGRVVDLIKRKKLKLEDIEWVVLDEADEMLNMGFKDDLDFILSHTPDQRQT
LLFSATMSKEVLRISNNYMDNPEEISSGKRNQGADKVEHFYFVVNGRDKYLALKRIADIN
PDIYAIIFCRTKRETQEISDQLVSDGYNADCLHGDLSQAQRDAVMGRYRKKHLQMLVATD
VAARGLDVNEITHVINYNIPDDLETYTHRSGRTGRAGKAGISMAIIGPRDINKIKQLERI
LGKTFTKAEVPAGDAVIEKQLMAFIEKVKASEVDEKQIEPFVNNIAVEFEDLSREDLIKK
FVSLEFNKFLDYYKNSADLNQNAKAGRDRDSNRGERSDRGRKGGDFTKLFLNIGEKDNLN
AGTLLGWINGLQSVPNGIEFGKIDVQRSFTFMEVESQHEQTILGALNVSEFDGRKVVAEP
KMGGGPRSSDRSSRSDRSDRPDRKRGSGFKKRPSAGGGDRKSGGRARVKAGSGGRRK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgttaacatttgaagaattaggccttaagcctgacatcctaaaagcaattttagaaatt
ggatttttagagcctactcctattcaggaaaaaactattccacatctattgaacacaaag
caagatttaattgctttagctcaaacaggttctggtaaaactgccgcatttggattgcca
gttttgaatcaaattgatggagattctaaaaagacacaatcattagtattatgtcctact
agagaattagcaattcaaattgccaatgactttaactcgtacactaaatattctaagaaa
ttagatgtagtgcctgtttatggtggtgcaagtatagaaacgcaaatcaaagccttgaac
aaaggagctcagattgtggtaggtacacccggtcgtgtagtggatttgattaaaagaaag
aaattaaaattagaagacattgaatgggtggttttagatgaagccgatgaaatgttgaat
atgggctttaaagacgatttagattttatcttatcgcatacgcctgaccaaagacaaact
ttattattctctgcgactatgtcaaaagaggtattaaggatttctaataactacatggac
aatcctgaagaaatatcttctgggaaaagaaatcaaggtgctgacaaggtagaacatttc
tatttcgtggttaatggaagagataaatacttagctttaaagagaattgctgatatcaat
cctgatatttatgcaatcattttctgtagaactaagagagaaacacaagaaatttctgat
caattagtatcagacggctataatgctgattgtttgcacggtgatttgtcacaagcgcaa
agagatgcagttatgggccgttacagaaaaaagcatttgcaaatgttagtggctactgat
gtggcagctagaggtttggatgtgaatgaaatcacgcacgtaatcaattacaacattcca
gatgatttggaaacttatacgcaccgtagtggtcgtacaggtcgtgctggaaaagcaggt
atttcaatggcgattatcggcccaagagacatcaataaaatcaagcaattagagcgtatt
ttaggtaaaactttcactaaagctgaagttcctgccggagatgctgtaattgaaaagcaa
ttgatggcttttattgaaaaagtaaaagcatcagaggttgatgaaaaacagatcgagcca
tttgtaaataatattgctgtcgaatttgaagatttaagccgtgaagacttaatcaagaaa
ttcgtttcattggaattcaacaagtttttagattactataagaactctgctgacttaaac
caaaatgctaaggcaggaagagatagagattcaaacagaggcgaaagaagtgatagagga
agaaaaggtggtgatttcactaaattatttttgaacataggcgaaaaggataatttaaat
gctggaactctactaggttggatcaacggtttacaaagcgttcctaatggaattgaattc
ggtaaaattgatgttcaaagaagctttactttcatggaagtagaaagccagcatgagcaa
acaatattaggcgcattaaacgttagcgaatttgacggacgtaaagtggttgccgaacca
aaaatgggcggtggaccaagatcgtctgacagatcaagccgatctgacagatctgacaga
ccggatagaaaaagaggaagcggatttaagaagcgtccaagtgctggtggtggtgacagg
aaatctggtggaagagcgagagtgaaagctggttctggcggaagaagaaaataa
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