Mucilaginibacter sabulilitoris: SNE25_02900
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Entry
SNE25_02900 CDS
T09599
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
msab
Mucilaginibacter sabulilitoris
Pathway
msab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNE25_02900 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msab03019
]
SNE25_02900 (recQ)
03400 DNA repair and recombination proteins [BR:
msab03400
]
SNE25_02900 (recQ)
Enzymes [BR:
msab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SNE25_02900 (recQ)
Messenger RNA biogenesis [BR:
msab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SNE25_02900 (recQ)
DNA repair and recombination proteins [BR:
msab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SNE25_02900 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
HEM4
ResIII
MarR_2
DUF6115
GerE
SWI2_SNF2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WPU94468
LinkDB
All DBs
Position
complement(645668..647824)
Genome browser
AA seq
718 aa
AA seq
DB search
MTPLQALQKYFGYNTFRHQQEAIIQHILNKQDVMALMPTGGGKSLCYQLPAVLLNGLTIV
ISPLIALMKDQVDSLNVSGIPAAFLNSAQTPDEQRLLVEKLRNNQVKLLYLAPERLFGNE
NKLVPFLKTLNVVQIAIDEAHCISQWGHDFRPEYLMLAQLKNEFPNVPVIALTATADKLT
QKDILEKLNLHKPAVFVSSFNRANITYTVVPKKNSFKQLIAFLNERREESGIIYCLSRKS
TEDLALDLKNAGFAAEAYHAGLNNETKAKNQEAFLRDDVKIIVATIAFGMGINKSNVRYV
VHIDLPKNIEGYYQETGRAGRDGLASEALLLYSPGDAGKLQHFARIEGNEEQSRIMLNKL
NDMVRYCQLQTCRRQYLMNYFDEAFPPNCGSCDVCLTEFKRFDGTLIAQKALSAVSRLNE
RFGVNYVIDFLRGSKNEKIREEHKQLKTYGIGADISKADWQRYIRELITMEYLQVTGDGY
PVLKLTDQSALVLKGIQKVEFIETQVTEEHHTEAVPLHEAELLSRLKNARRDIAEGENVP
AYIIVSDATLLEMATYLPQSLDELRLISGFGDVKLARYGRELLQPVKDYCKEKSLESKIA
YKSAKRERKPKTERTRSPRSGTDTRSETFNLYRQGKNVMEIAAERGLSQVTIEGHLSHFV
QTGDLDVNELVSEAKLHVILEALESYGAERLAPLKEVLGDAYTYGEIKAVISWMNKNQ
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgactccattacaagccctgcaaaaatattttggttacaacacgttcagacaccagcag
gaagctattattcagcatattttaaataagcaggacgtaatggccctgatgcccacaggc
ggcggtaaatcattatgttaccagttgcctgccgtattgctcaacggacttaccattgta
atatcaccactgattgcgttaatgaaagaccaggttgacagtctgaatgtgagcggcata
cctgcagcttttcttaattcggcccaaacaccagatgaacagcgtctgctggttgaaaaa
ctccggaataaccaggttaaactgttataccttgcgcccgaacgtttgtttggcaatgag
aataaactggtaccatttttaaaaacactcaatgtggtgcagatagccattgacgaggca
cattgtatctcccaatgggggcacgatttcaggcccgaatacctgatgctggcccagcta
aaaaatgagttcccgaatgtacctgttatcgcgcttaccgccaccgccgataagctcacc
caaaaagatatactcgaaaaattaaacctgcacaagcctgccgtgtttgtgtcgtcgttt
aaccgtgcaaatattacttacacagttgttcccaaaaaaaacagctttaaacaactcatt
gcctttttaaatgaacgcagggaagaatcgggcattatatattgcctttcccgcaaatca
acagaagacctggcccttgatcttaaaaatgcaggtttcgcggccgaagcatatcacgct
ggcttaaacaacgaaacaaaagccaaaaatcaggaagcttttttgcgcgatgatgtaaag
atcattgtggctaccattgcctttggtatgggtatcaacaaatcaaacgtgcgctatgtg
gtacatatagacctgcccaaaaacattgagggctattaccaggaaacgggcagagccggc
agggatggtttggcgtcggaagccctgctcctctactctcccggcgacgccggtaagctg
cagcactttgcccgtattgaaggaaacgaggagcaaagtcggatcatgctcaacaaactg
aacgatatggtgcggtattgtcagctgcaaacctgccgcaggcaatatctcatgaattat
tttgatgaggcttttccgccaaactgcggctcctgcgatgtttgcctaaccgagtttaaa
cgttttgatgggacactcattgcccaaaaggcattatcggctgtatcccggttaaacgaa
cggtttggggttaattatgtaattgattttttacggggatcaaaaaacgaaaagatccgc
gaagaacataaacagcttaaaacttatggcataggcgccgatatcagcaaagccgactgg
cagcgttacatccgcgaactgatcacaatggaataccttcaggtgaccggtgatgggtac
ccggttttaaaattgacagatcaaagcgctttagtgctcaaaggcatacaaaaggtagaa
tttattgaaacccaggtaaccgaagaacaccacaccgaggctgtgccactacatgaggcc
gaattattaagtcgccttaaaaatgctcgtcgggacattgccgagggggaaaatgtgcct
gcttatattattgtatcagatgccacgttgcttgaaatggccacctacctgccacagagt
ttggatgaactgagacttatctccggttttggcgatgttaagctggcccgttatggccgc
gaactgctgcaaccggttaaggattattgcaaggaaaagagcctggaatcaaaaattgct
tataaatcagcaaaaagggaacgtaaacccaaaactgagcgaaccagatcaccgcgtagt
ggcaccgatacccgttcagaaacttttaatttataccgtcagggtaaaaatgttatggaa
atagctgccgaacggggactgtcacaggtaaccattgaagggcatttgagccattttgta
caaaccggagatctggatgtaaacgaactggtgtccgaagctaaattacatgtaattttg
gaggccttagaaagttacggagcggaacgccttgcgccgctaaaagaagttttaggcgat
gcctatacctacggcgaaattaaagccgtaataagctggatgaacaaaaaccaatag
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