Mucilaginibacter sabulilitoris: SNE25_05420
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Entry
SNE25_05420 CDS
T09599
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
msab
Mucilaginibacter sabulilitoris
Brite
KEGG Orthology (KO) [BR:
msab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msab03019
]
SNE25_05420
03009 Ribosome biogenesis [BR:
msab03009
]
SNE25_05420
Messenger RNA biogenesis [BR:
msab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SNE25_05420
Ribosome biogenesis [BR:
msab03009
]
Prokaryotic type
rRNA processing factors
SNE25_05420
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
Mucin_bdg
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
WPU94960
UniProt:
A0ABZ0TUZ6
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All DBs
Position
1242463..1244013
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AA seq
516 aa
AA seq
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MIKELIIDSSPNGATIALLQDKQLVELHKEQVSNNYTVGDIYLGRIKKIMPSLNAAFVDV
GYEKDAFLHYLDLGPQVQSLLKLTKQVRSGGYQSKLLDGFKLEGDINKGGKISEILSKNQ
LIPVQIAKEPISTKGPRLSSDLSIAGRYVVLVPFSEAISISKKIKSNTERNRLRKVVESI
KPKHFGVIIRTVSEGKGVEELQKDLLDLISKWEAFITKLPSVEPSKKVLGEIGRTSTILR
DILNPDFQHIYVNDNSMFEEIRSYIHEISPDMESIVRMHKHKEPIFEHFGVDKQIKGAFG
KTVNLAGGAYLVIEHTEALHVIDVNSGNRTASKENQEENAYQVNKEAAKEIARQLRLRDM
GGIVVIDFIDMHKPQNRKELFDFLRTEMQYDRAKHTILPPSKFGLVQITRQRVRPEMNIV
TSEVCPTCNGTGTIRPTILLMDDIENNFNYILDEQNEKGITLSVHPYIEAYIKKGIYNRQ
MKWFVKYGQWIKVKSNPAYQITEFRFFTSKDEEIKL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
ttgataaaagaattaattatcgattcatccccaaacggggctaccattgcattattacag
gacaaacaactcgtagaacttcataaagagcaggtcagcaacaattatactgttggtgat
atttacctcgggcgtataaagaagattatgcccagtttaaatgcagcctttgtagacgtt
ggctacgagaaggatgcctttttgcattatcttgaccttggcccgcaggtacaaagcctg
cttaagttaaccaagcaagtacgtagcgggggataccaatcgaagcttttggacggcttt
aagctcgaaggcgatatcaataagggaggaaagatctctgagatattgtcaaaaaaccag
cttattccggtacaaatagctaaggaacctatatcaaccaaaggaccacgcttaagctct
gatctttcaattgccggccggtatgtggtattagtaccattttcggaggctatctctatt
tctaaaaaaataaagagcaatacagagcggaatcgtttacggaaggttgttgaaagcatt
aagccaaagcattttggcgttattattcgtactgtatccgaaggtaagggtgttgaagag
ttgcagaaagatctgcttgatctgatatctaaatgggaagcatttataaccaaactacca
tctgttgaaccatcaaagaaggttttgggcgaaattgggcgtacatccactatcctgagg
gatatactgaaccccgattttcagcatatttatgtaaatgataacagtatgttcgaagaa
attcggtcatacatccatgaaatatcgcctgatatggaaagtatagtccgtatgcacaag
cataaggaacctatatttgaacattttggcgttgacaagcaaattaaaggcgcttttggc
aaaacagttaatcttgccggtggtgcttacctggtaattgaacataccgaagcattgcac
gttattgacgttaacagcggcaatcgtacagcaagtaaggaaaaccaggaagagaatgcc
taccaggtaaataaagaagcggcgaaggaaattgcccgtcagttgcgcctgcgcgatatg
ggcggtatcgtagtgatcgattttatcgatatgcacaagccgcagaatcggaaagaactg
tttgattttctgcgtaccgaaatgcagtacgatagggcaaaacataccattttacctcca
agtaaatttggtttggtgcaaattacacggcagcgtgtaaggcccgaaatgaacattgtt
accagtgaagtatgcccaacctgtaatggtacaggtaccatcaggccaactattttgctg
atggatgatattgagaataacttcaattatattttggatgagcaaaatgaaaaagggata
accctcagtgtacacccttacattgaagcctacatcaaaaaaggtatctacaaccgccag
atgaagtggtttgtaaaatacggacagtggataaaggttaaaagcaatcctgcttaccag
atcaccgagtttcgtttcttcacatccaaagacgaagaaataaaactgtaa
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