Mucilaginibacter sabulilitoris: SNE25_07190
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Entry
SNE25_07190 CDS
T09599
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msab
Mucilaginibacter sabulilitoris
Pathway
msab00040
Pentose and glucuronate interconversions
msab01100
Metabolic pathways
msab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SNE25_07190
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SNE25_07190
Enzymes [BR:
msab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SNE25_07190
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
WPU95307
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Position
1663639..1665075
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AA seq
478 aa
AA seq
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MERKTKPFTRVVTVSLMLSAVVFFGSCQKNGEAPAGNMQDDSALTTSLETDAVTSTTSAT
SSLLTVSLTGLKSDGGYAYKIGYPLSKSGDSNSQPSVSKLRLFENGKELNPAHSDHQDIR
DYGKGRFSHWGTTLVFSASDNSNPAKNGRKYTYTLDGTTGTTTAAKPPANQSSTAPASSA
GLIGYAAYNGTTTGGKGGASVTVTSLSALRAALDDGTSRIVYVSGTIKGSGDDAVYVKSN
KSIIGKPGAVIEGVSLYIFTVSNIIIQDIRFKNYVTDAAVMIKMQAHHIWVDHCEFSTDR
NHGWDYWGKDISITREADYCTVSWCKFHDTNLSVLISGGIEGHESDKGHLHVTMHHNYWY
NIGEREPSMNYGSVHMFNNYHLNNDSYSIGARAGGTVRTDNEYFSNCHKPITTDLDGDPP
GYISGASTNTYVNSGKNDITTGTSTWVPPYSYKTALDAAANVPSLVTKGTGPRSTSVN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaaaacaaaaccttttacaagagtggtaacagtcagcttaatgctaagcgca
gttgtcttctttggcagttgtcagaaaaacggagaagctcccgcgggcaatatgcaagat
gacagcgcgctaacaacaagtttggagactgatgccgtaacaagcaccacgagtgcaaca
tcgagtttattaacagtaagtttaacgggtttaaaatcagatggagggtatgcctacaaa
attggatatcctttgagcaaatcaggcgattcaaattcccagccatcagtttcaaagctc
cggctgtttgaaaatggcaaagaattaaacccagcccattcagaccatcaggacatacgc
gactatggtaaagggcgcttcagccactggggaactaccctggttttttcagcctctgac
aactctaacccagcgaaaaatggccgtaagtacacctatactttagatggtactaccgga
acaaccacagctgcaaaaccaccagcaaaccaatcatcaacagctccggcgtcaagtgcc
ggccttattggttatgccgcatacaacggtacaacaactggaggcaagggtggtgcttcg
gttacagtgaccagtctttcggctttaagggctgcattagatgatggcaccagccggatt
gtttacgtaagcggtactattaaaggatcgggcgatgacgcagtttatgtgaaatcgaac
aaatcgatcattggaaaaccgggtgctgtaattgaaggtgtttcgctatacatatttact
gttagcaacattattatccaggacattaggtttaaaaactatgtaacagatgccgcggtt
atgatcaagatgcaagctcatcatatatgggttgaccattgcgagttttcaacagaccgt
aaccatggctgggactactggggtaaagatatctctatcactcgcgaagctgattattgt
acagtttcatggtgtaagttccatgatactaacttgtctgttttgataagcggcggtatc
gaaggtcatgaatctgataaaggtcacctgcacgtaactatgcaccacaactactggtat
aacattggcgaaagagagccttctatgaattacggcagtgtacacatgtttaacaactac
catttaaataacgacagttattcaataggtgcacgcgctggtggtacggtacgtacagat
aatgagtatttctcaaactgtcataaaccgattaccacagatttagacggagatcctccg
ggttacatcagtggtgcttcaacaaacacttatgttaacagcggtaaaaatgatataacc
acaggaacatcaacctgggtaccgccatactcttacaaaacggctttggatgcagctgca
aatgtaccttctttggttacaaaaggtactggtccaagatcaacatctgttaattaa
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