Mucilaginibacter sabulilitoris: SNE25_10120
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Entry
SNE25_10120 CDS
T09599
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
msab
Mucilaginibacter sabulilitoris
Pathway
msab03030
DNA replication
msab03430
Mismatch repair
msab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SNE25_10120 (dnaE)
03430 Mismatch repair
SNE25_10120 (dnaE)
03440 Homologous recombination
SNE25_10120 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msab03032
]
SNE25_10120 (dnaE)
03400 DNA repair and recombination proteins [BR:
msab03400
]
SNE25_10120 (dnaE)
Enzymes [BR:
msab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SNE25_10120 (dnaE)
DNA replication proteins [BR:
msab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SNE25_10120 (dnaE)
DNA repair and recombination proteins [BR:
msab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SNE25_10120 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
MCM10_OB
DUF6282
Motif
Other DBs
NCBI-ProteinID:
WPU95872
LinkDB
All DBs
Position
2355772..2359356
Genome browser
AA seq
1194 aa
AA seq
DB search
MPDFSHLHVHTQFSLLDGAADISKLYKKAAADGMKALAITDHGNMFGVFKFVAEAGKHNV
KPIVGCEFYVVEDRHKKQFTKEKKDVRRHQLMLAKNPEGYKNLVKLCSLGYMEGLYSKWP
RIDKELILKYHKGLIATTCCIGASVPQAILRETPEKAEEEFKWWLDLFGEDFYIELQRHD
IPEQTTINNVLLTYAKKYNVKVICSNDSHYVDQQDSNAHDILLCVNTGDMQSTPIATDEE
GGRGYRFGFPNDQFYFKTQAEMGSLFNDVPESLDNTNEIVDKVEVLKLKRDILLPNFVIP
DEFKIHNTPDADTLNQWEYLKHLTFTGAKERYIDISPETEERINFELFTIRTMGFAGYFL
IVADFIKHGRDIGVFIGPGRGSAAGSVVAYCTGITNIDPMKYNLLFERFLNPDRKSMPDI
DTDFDDAGRQKVIDYVVEKYGKNQVAQIITYGSMAARTSIQDVGRVLDIPLSEMTAIKKL
VPDTLGITLKEAIEQVPELKEILNGNDLRAQVLREAEKLEGSVRNTGVHAAGIIIAPYDL
TDIVPVATAKDSDLLVTQYDGRVIEDAGVIKMDFLGLKTLTIIKDALRMIKQNHGVSIDI
DYIPLDDQETYELYQRGDTNGTFQFESDGMQMYLRDLKPDKFEDLIAMNALYRPGPIEYI
PNFIKRKHGQEPIVFDLADMEEYLGETYGITVYQEQVMLLSQKLAGFSKGDADVLRKAMG
KKQIEVLNKMEAQFMDGAIAKGHPKDKLTKIWTDWKAFAQYAFNKSHSTCYAFVAYQTAY
LKAHYPSEYMAAVLNNQNNMEKITFFMEECRRMNVEVLGPDINESDMSFSVNKRGQVRFG
LTGVKGVGDKAVESIIEERDANGPYNSLYDFARRSNTRSVNRKSYENLVYGGAFDEFGTK
RAQFFAKTELGVLTGVERLIKYANDYQNVQSSSQSSLFGGSVASYVPEPAMPEVEEWPLI
EKLKYEKTVIGIYLTGHPLDNYKVELERFCNSTISDLKLMQKARSGEGGEDIMGAFNELR
KRGEIRIGGLVGNVQHKMTKTGKPFGTFVLEDYNESYEFVLFGEDYVKFRNLMMDGYFLH
LKGNIEEKFRQKDNWDLRIQVMSLLSEMRDKMTKSLTVCIDMHSLNSKLLDDIQHAINEN
NQKYPVQNCKLRFQIKDREEAMLVELASKNFRVNPSDDLMADIFNLTNMQPVLN
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgccagatttttctcacttacacgtacacacccagttttccttacttgacggtgccgcc
gatatatcaaagctgtataaaaaggctgctgccgatgggatgaaagcgctggccataacc
gatcatggcaacatgttcggggtgtttaagtttgttgccgaagccggtaaacataatgta
aaacccattgtaggctgcgaattttacgtagtagaagaccgccataaaaagcaattcacc
aaagagaaaaaggacgtacgccgccaccagctgatgctggccaaaaaccccgaaggctat
aaaaacctggtgaaactgtgctctttgggttatatggaaggcttgtacagcaaatggccg
cgtattgataaagaactgatattaaaatatcataaaggcttaatagctaccacctgttgc
attggcgcatcggtaccgcaggctatattaagagaaacccctgaaaaggctgaagaagaa
tttaaatggtggcttgatctgtttggcgaagatttttatatcgaactacagcgccatgat
atcccggagcaaactactattaataatgtattgcttacctatgctaaaaaatataatgta
aaggtaatatgctccaatgattcacattatgtagatcagcaggactccaacgcgcacgat
attttgctttgtgtaaataccggcgatatgcagagcaccccaatagctactgatgaagaa
ggtggccggggctatcgtttcgggttcccgaatgaccagttttattttaaaacacaggcc
gaaatgggcagtctgtttaacgacgttcctgaatcattggataataccaacgagattgtg
gataaggtggaagtgctgaaactgaagcgtgatatcctgttgcccaactttgttatccct
gatgaatttaagattcacaatacccctgatgccgatacgcttaaccagtgggaatattta
aaacatttaacgtttaccggtgctaaagagcgctatatagatatttcgccggagacggaa
gaacgtatcaattttgagctgttcactatacgtaccatgggttttgccggttacttcctg
attgtggccgactttattaagcatggccgggatatcggtgtatttattggtccgggtcgt
ggttcggcagccggatcggtggtggcctattgtacggggatcaccaatatcgatccgatg
aaatataatctcttgttcgagaggttccttaacccggatcgtaaatcaatgcccgatatt
gataccgactttgacgatgccggccgccaaaaagttattgactatgtggtagaaaaatat
ggcaaaaaccaggtagcacagattattacctatggttcaatggctgcccgcaccagtata
caggacgttgggcgtgtactggatattccgctatctgaaatgaccgctattaaaaagctg
gttcctgatactttgggtattactttaaaggaagctattgaacaggtacccgagctaaaa
gaaatattaaacggaaacgatttacgtgcccaggtattgcgcgaggccgaaaagctggaa
ggctcggtacgtaataccggtgtacatgctgcaggcatcatcattgctccttatgacctt
acggatattgttccggtggctaccgctaaggactctgacctgttggttacccagtatgac
ggccgtgtgattgaggatgcaggcgttattaagatggactttttgggtcttaaaaccctt
actattattaaggacgcgctgaggatgatcaagcaaaatcacggcgtaagcattgatatt
gattacattccgcttgatgaccaggaaacttatgaactttatcaacgtggagataccaac
ggtactttccagtttgaaagtgatggtatgcaaatgtacctgcgcgacctgaagccagat
aagtttgaagacttaattgctatgaacgcactgtaccgcccggggccgatagagtacata
cccaactttattaaacgtaaacacgggcaggaacctattgtatttgaccttgcggatatg
gaggagtacctgggcgaaacctacggtattaccgtgtaccaggaacaggtgatgctttta
tcgcaaaaactggccggctttagtaaaggcgatgccgatgttttgcgtaaggccatgggt
aaaaagcaaattgaggtattgaataaaatggaggcccagtttatggacggagccattgcg
aaagggcaccccaaagacaagcttaccaaaatatggacagactggaaggcttttgctcaa
tacgccttcaataaatcgcattctacctgttatgcttttgtggcatatcaaactgcttat
ttaaaggcgcattacccatccgaatacatggcagcggttttaaataaccagaacaatatg
gagaagataacctttttcatggaagaatgccgccggatgaacgtagaggttttgggaccg
gatatcaacgaatcggacatgtcgttctctgtaaataaaagggggcaggtgcgttttgga
ttgactggtgttaaaggtgtgggcgataaagcggtagagagcattatcgaagagcgtgat
gccaatggaccttacaattctttatatgatttcgcgcgtcgttccaatacccgcagtgta
aaccgtaaatcgtacgaaaacctggtttatggcggcgcttttgatgagtttggtacaaaa
cgggcgcagttttttgctaaaacagaattaggtgttttaaccggtgttgaacgccttatt
aaatatgcaaatgattaccagaatgtgcaaagcagttcacaatcgtcgttattcggcggt
tcggtagcatcttatgtgcctgagccggccatgcccgaggtagaagaatggccgctgata
gaaaaactgaagtacgaaaaaacggtaattggtatttatttaaccggccacccgcttgat
aattataaagttgaactcgaaaggttttgcaacagcactatcagcgatctgaagctgatg
caaaaagcacgctctggcgaaggcggtgaggatattatgggcgcctttaacgagcttcgt
aaacgaggcgagatcagaataggtggtttggttggaaatgtacagcataagatgactaaa
acagggaaaccctttggtacttttgtactggaggattataacgagtcgtacgagtttgta
ttgtttggcgaagattatgttaaattccgcaacctgatgatggatggttattttctgcac
ctgaaagggaatatcgaagaaaaattccgtcagaaggataactgggacctgcgtatacag
gtaatgagcctgctctctgaaatgcgcgataaaatgaccaagtcgttaaccgtatgcatt
gatatgcatagtttgaacagcaaactattggacgatatacagcatgccattaatgaaaac
aatcagaaatacccggtgcaaaactgcaaactgcgtttccagatcaaagaccgcgaagaa
gccatgctggttgagctggcctccaaaaatttcagggtaaaccccagtgatgacctgatg
gctgatatttttaatttaaccaatatgcagccagtgctcaattaa
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