KEGG   Mucilaginibacter sabulilitoris: SNE25_13935
Entry
SNE25_13935       CDS       T09599                                 
Name
(GenBank) DNA topoisomerase IB
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
msab  Mucilaginibacter sabulilitoris
Brite
KEGG Orthology (KO) [BR:msab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msab03032]
    SNE25_13935
   03400 DNA repair and recombination proteins [BR:msab03400]
    SNE25_13935
Enzymes [BR:msab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     SNE25_13935
DNA replication proteins [BR:msab03032]
 Prokaryotic type
  DNA Topoisomerases
   SNE25_13935
DNA repair and recombination proteins [BR:msab03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SNE25_13935
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: WPU96619
LinkDB
Position
3196716..3197801
AA seq 361 aa
MNRLLKKLEKIGRDPKITAKAVGLRYVSDSSPGYTRKKSGKGWSFYDADGKLVKDKEQIS
RFNKLVIPPAYTNVWISPYENGHLQFTGTDAAGRKQYRYHAGWNQIRNQSKYHRLQTFAS
YLPAIREQVDKDLARRNLDHDKVVALVVRLMELTGIRVGNEEYKKLYGSFGLTTLQNRHI
KIEGSNMRFEFKGKKGVFHKVTLQSKKLARLIKQCRDIPGKELFQYYNEAGERCSIGSGD
INDYLKNITGEDFTAKDFRTWAGSVSALYAFKDAGEFATVTECHKKIVGVLDEVAINLGN
TRTVCKKYYVHPSVIKSYEEGTIFKYISHLDEDNDVKAAELNKAEKALLNLLETEKLAEA
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaaccgtcttcttaaaaagctcgaaaaaattggtcgtgaccccaagatcaccgcgaag
gcagttggcctccgctacgtatctgattcatcgccgggatatacccggaaaaaatcgggc
aagggctggagcttttatgatgccgatggtaagctggtaaaagataaggagcagatatcc
cgcttcaacaagttggtgattccgccggcctataccaacgtatggatatcgccgtatgaa
aatggccacctgcagtttacgggtaccgatgccgccgggcgcaaacaataccggtaccat
gccggctggaaccaaatccgtaatcaaagtaaatatcatcgcctgcaaacttttgcatcc
tatttacccgctatacgggaacaggtagataaagacctggcccgccgtaatcttgaccac
gacaaggtagtggctctggtggtacgtttaatggaacttaccggtatcagggtagggaat
gaggaatataaaaaactttatggatctttcggacttaccaccctgcaaaaccggcatata
aaaattgaaggttcaaatatgcgctttgaatttaaagggaaaaaaggtgtttttcataag
gtaacactacagagtaaaaaactggcaaggctgataaagcaatgccgggatattccggga
aaagaactttttcagtattataatgaagccggtgagcggtgcagtatagggtcgggcgat
attaatgattaccttaaaaatataactggcgaagattttactgccaaagatttccgcaca
tgggcgggcagtgtgagtgccctgtatgcttttaaggatgccggcgaatttgccaccgta
accgagtgccataaaaaaattgtcggtgtgcttgatgaggtagccattaacctgggtaac
acccgcacagtttgcaaaaaatattatgtgcacccttcggtaataaaaagctacgaggaa
ggcaccatatttaaatacatcagccaccttgatgaagacaatgatgtaaaagcagcagaa
cttaacaaagccgaaaaagcactgttaaacctgcttgaaacagaaaaactggccgaggcc
agttaa

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