Mucilaginibacter sabulilitoris: SNE25_14760
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Entry
SNE25_14760 CDS
T09599
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
msab
Mucilaginibacter sabulilitoris
Pathway
msab02020
Two-component system
msab02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
msab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SNE25_14760 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SNE25_14760 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msab03021
]
SNE25_14760 (rpoN)
Transcription machinery [BR:
msab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SNE25_14760 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
MarR
LacI
HTH_21
Motif
Other DBs
NCBI-ProteinID:
WPU96783
LinkDB
All DBs
Position
complement(3379368..3380843)
Genome browser
AA seq
491 aa
AA seq
DB search
MLKQNLQQKLLQKLSPQQIQFIKLLQVPTVSLDTRIKEELEENPALEDLSLTNLNEPEEQ
YPDRDPDEDTYSSDEEKGEMDEFNIDDYLQEDNVNDYGSRYDQNGDDEDERKEIPIAVQN
SFFESLQLQLDLLPLSDKDFRIGKQIIGSLDDDGYLRRPIMSLTDDLAFSQNVMAEDEEV
EDMLKVIQGFDPAGVGARSLQECLLIQLRKKDPNDPIIAKAIIVVEQYLDEFTRKHYDKL
EKSLNMGSDELRGVVNEILKLNPKPGDSNELNTKQMQVIPDFHITNNDGTLILTLNSKNA
PELRVSRSYQEMFQHYDKASQKDKKLKEAVQFVKQKLDSAKWFIDAIKQRQQTLLKTMNA
IMQYQYEFFLTGDDKNLKPMILKDIADRINMDISTVSRVANSKYVQTEFGTFLLKSFFSE
AIQTESGEEVSNKEVKKILEEHIGKEDKRHPLADEKLTDILKDAGYNIARRTVAKYREQM
NIPVARLRREL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacagaatcttcaacaaaaacttttacaaaaactttcaccgcagcaaatacaa
tttattaaattgttgcaggtgccaaccgtttcgcttgatacccggataaaagaggaactg
gaagaaaatcccgcacttgaagatttgagcctgactaacttaaatgaacctgaagaacaa
tatccggaccgagaccctgacgaagacacctatagcagtgatgaagaaaagggcgagatg
gacgaatttaatattgacgattacctgcaggaagataatgtaaatgactacggatcgcgc
tatgatcaaaatggcgacgacgaagacgaacggaaggaaatacccattgctgtacaaaat
tcattttttgaaagcttacaactacaacttgacttgctgccacttagcgacaaggatttc
aggattggcaaacaaataattggcagccttgatgatgacggttatttgcgtcgccctatc
atgtcgttaaccgacgatcttgcattttcacaaaatgtaatggcggaggatgaagaagta
gaggatatgctgaaagttatacagggctttgatcctgcaggcgttggcgcacgcagcctc
caggaatgtttgcttatacagctccgtaaaaaagaccccaacgatcccattattgcaaaa
gctattattgttgtcgagcaatatctggatgaatttacccgcaaacattatgataagctc
gaaaaatcattaaatatgggttcggacgaattgcggggggtagttaatgaaattttaaag
ttaaaccccaaacccggcgattccaacgaactcaataccaaacaaatgcaggtgataccc
gattttcatatcaccaataatgatggtacgcttatattaacactaaactcaaaaaacgct
ccggaactcagggtaagccgctcttaccaggagatgtttcagcattatgacaaggcttct
caaaaggataaaaaattaaaagaggctgtgcagtttgtaaaacaaaaactcgactcggct
aagtggtttatcgacgctattaagcaacggcagcaaaccttgttgaaaaccatgaatgcc
attatgcaatatcaatatgagttttttttaacaggcgatgataaaaatctgaaacccatg
atcctgaaggatattgccgaccggataaatatggatatctcaaccgtatcgcgggtagcc
aattcaaaatatgtacaaaccgaatttgggaccttcctgttaaaatctttcttttccgaa
gctatacaaaccgaaagcggcgaagaggtatcaaacaaagaggttaaaaaaattctggaa
gaacatatcggcaaagaagataaacgccatccgctggctgatgaaaaattgactgacata
ttgaaagacgccggctacaatattgcccgccgcaccgttgccaaatatcgggagcaaatg
aatatcccggtggcacggcttagaagagaactttag
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