Mucilaginibacter sabulilitoris: SNE25_17420
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Entry
SNE25_17420 CDS
T09599
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msab
Mucilaginibacter sabulilitoris
Brite
KEGG Orthology (KO) [BR:
msab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msab03032
]
SNE25_17420 (topA)
03400 DNA repair and recombination proteins [BR:
msab03400
]
SNE25_17420 (topA)
Enzymes [BR:
msab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SNE25_17420 (topA)
DNA replication proteins [BR:
msab03032
]
Prokaryotic type
DNA Topoisomerases
SNE25_17420 (topA)
DNA repair and recombination proteins [BR:
msab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SNE25_17420 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
WPU91102
LinkDB
All DBs
Position
complement(4063582..4065984)
Genome browser
AA seq
800 aa
AA seq
DB search
MAKNLLIVESPAKAKTIEGYLGKDFTVKSSYGHIRDLVKSEDAIDIANNFTQKYEVPSDK
KQVVSELKKLAKEAEMVWLASDEDREGEAISWHLFETLGLKDATTKRIVFHEITKPAILR
AIDTPRKIDYNLVNAQQARRVLDRLVGFELSPVLWKKVKPSLSAGRVQSVAVRLIVDRER
DINKFKSEAAFKIVAIFGKGKEAFKAELPERFAQQEDAEKFLNDCLGADFDVRSLETKPA
KRSPAAPFTTSTLQQEASRKLGYSVARTMQVAQRLYESGYITYMRTDSVNLSETALNAAQ
QEIVSAYGEKYHHHRKYKTKNASAQEAHEAIRPTYFNNHTIDGDSAEKRLYELIWKRAIA
SQMSEAQFEKTTAKISISSRKEELIANGEVMKFDGFLKVYLESEDDEEDTQQDGENAMLP
PLTRGQRLALQEMSATERFSRPPARYTEASLVKKLEELGIGRPSTYAPTISTIQNRGYVV
KEEREGKTRNFRVLTLKGEAIVKETRTENTGAERGKLFPTDIGAVVNDFLVQYFNDIVDF
NFTASVEKQFDEIAQGLKEWTAMLHDFYNPFHKEVQSTIETADKATGERELGVHPESGKK
VSVRIGRYGPFVQVGESATDENKEEKPLYASLRNGQSIETITLDEALELFKLPKVVGEYE
GKIMKVAIGRFGPYISHNSAFVSLPKEIDPLDVTEEQAIELINAKRKKDAEKLIKAFDED
PDVKILNGRWGAYIEFGKLNVKIPKDRDPLTLTYEECKALADAMPKDAKKGRFGKAKVAA
AAKPAAKKAPAKKKAAPKKK
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaacctactcattgttgaatcaccggcgaaagccaaaactatcgaaggatat
cttggtaaagactttacagtaaagtcaagttatggccatattcgtgacctggtaaagtct
gaagatgcgattgacatagctaataacttcactcaaaaatacgaagtaccatctgacaaa
aaacaggtggtgagcgagttaaagaaattagctaaagaagccgaaatggtttggctcgca
tcggacgaggaccgtgagggagaagctatatcctggcatttatttgaaacattgggttta
aaggacgcaactactaaacgtattgttttccatgaaataacaaaaccagccattttacga
gccattgataccccgcgtaaaattgattataacctggtaaatgcccagcaagcacgccgg
gtgctcgataggcttgtaggctttgagctctctcctgttttatggaaaaaggttaaacca
tcgctttctgccgggcgtgtacaatcagtagccgtaaggttaattgttgaccgcgaaaga
gatattaacaaatttaaatcagaagctgcttttaaaattgtagccatatttggtaaaggc
aaagaagcatttaaagccgaactgcccgagcgttttgctcaacaggaagatgctgaaaaa
ttcttaaatgattgccttggtgccgattttgatgtacgttcattagaaacaaaaccagcc
aaacgttcgcctgcggctccgtttacaacctccaccctgcaacaggaagccagcagaaaa
ctgggctattctgtagcacgtaccatgcaggttgcccaaaggctttacgaatcgggttat
ataacctatatgcgtacagattcagttaatttgtctgaaaccgcgttaaatgctgcccag
caggagatcgtatctgcctatggcgaaaaataccaccatcaccgtaaatataaaaccaag
aacgccagcgcgcaggaagcacacgaagccataaggcctacttatttcaataaccatact
attgatggagattcggccgaaaaacgcttatatgaactgatctggaaacgtgccatcgct
tcgcaaatgagtgaagcccagtttgagaaaaccactgcaaaaatcagtatatcaagccgt
aaagaagaattaattgccaatggcgaagtaatgaagtttgacggtttcctgaaagtttac
cttgaatcggaagatgacgaggaagatacccagcaagacggagaaaacgccatgttacca
ccgttaacccgcggtcagcgcctggcccttcaggaaatgtcggctaccgaacgcttctct
cgtccgccggcgcgctatactgaggcaagtctggttaaaaaactggaagaactgggcata
ggccgtccgtcaacctacgcccctaccatatcaaccatccaaaaccgtggatatgtggtt
aaagaagagcgcgaaggtaaaacacgcaactttagggtattaaccttaaaaggtgaagcg
atagttaaagaaaccagaacagagaacacaggagccgaacgaggtaagctattccctacc
gatattggcgctgtagtgaacgacttcctggtacaatattttaatgatattgttgatttt
aactttaccgccagcgttgaaaaacaatttgacgaaatagcacaggggcttaaggagtgg
acagcgatgcttcacgacttttacaacccttttcacaaagaagtacaaagcaccattgaa
accgccgacaaagctaccggcgaacgcgaattaggtgtccatcccgaaagcggtaaaaaa
gtatctgtacgtattggtcgctatggcccgtttgtacaggtaggtgaaagcgctaccgac
gaaaataaagaggaaaaacctttgtatgcaagcttaagaaatggtcaaagtatagaaacc
atcacccttgacgaagcgcttgaattatttaagctgccaaaagttgttggcgaatatgaa
ggcaagataatgaaagtggctatcggtcgtttcgggccatatataagccataacagtgcc
tttgtttctttaccaaaagaaattgacccgttagacgttactgaagaacaggcaatagag
ttaattaatgccaaacgaaaaaaagatgccgagaagcttatcaaggcttttgatgaagat
ccggatgtgaaaatattaaacggacgttggggcgcgtatattgagtttggcaagctgaac
gttaaaattcctaaggacagggatccattgactcttacttatgaggaatgtaaagccttg
gccgatgcaatgcccaaggatgcaaaaaaaggacggtttggtaaagctaaagtagccgcg
gctgcaaaaccagcagcaaaaaaagctccggccaagaaaaaggcagcgcccaagaaaaaa
taa
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