Mucilaginibacter sabulilitoris: SNE25_28730
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Entry
SNE25_28730 CDS
T09599
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
msab
Mucilaginibacter sabulilitoris
Pathway
msab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SNE25_28730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msab03021
]
SNE25_28730
03400 DNA repair and recombination proteins [BR:
msab03400
]
SNE25_28730
Enzymes [BR:
msab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SNE25_28730
Transcription machinery [BR:
msab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SNE25_28730
DNA repair and recombination proteins [BR:
msab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SNE25_28730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
HHH_XRCC3_RpoA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WPU93309
UniProt:
A0ABZ0TKG3
LinkDB
All DBs
Position
complement(6817595..6818587)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQKPDKVIMQKANDFDGTFEFRPLEPGFGVTIGNALRRILLSSLEGYAITSVRFS
GVTHEFSTIKGVVEDVTEIILNLKQVRFKKTGESGDNEKIFVIINGQDAFKAGDITKFSN
NFTVLNPDLVICNMDSSVTLEIELTVGKGRGYVPSEENKNPDANVGVIAIDSIFTPIKNV
KYTIENYRVEQKTDYEKLVLDIATDGSIHPEDALKEAAKILIQHFMLFSDENMMLEAQAK
EETKEVDEEILHMRKILKTELVDLDLSVRALNCLKAADIRSLADLVSYDVADMLKFRNFG
KKSLTEIQDLVKSKGLSFGMNLSKFKLDEE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttagcatttcaaaaaccagacaaggttatcatgcagaaagcaaacgatttt
gatggtacgtttgagtttcgtccgttagaaccaggcttcggtgtaaccattggtaatgct
ctgcgtcgtatcttactttcatcactcgaaggttatgccattacttctgtacgtttttca
ggagttacgcatgagttttcaaccataaaaggagttgttgaagatgttaccgagatcatt
ttgaaccttaaacaagttcgtttcaaaaaaacaggtgagtctggcgataacgaaaagata
tttgttataataaatggccaggacgcttttaaagctggagatattactaaattctctaat
aactttactgttttaaaccctgatctggttatctgtaacatggattcatcagtaacgctt
gaaatagagcttactgttggcaaaggccgtggttatgttccgagcgaggaaaataaaaac
ccggatgcgaacgttggtgtaattgccattgattccatctttacgcctataaaaaacgta
aaatataccattgaaaactatcgtgttgagcaaaaaaccgactatgaaaaattagttctg
gatattgctaccgatggctcaattcaccctgaagacgcattaaaagaagctgctaagata
cttattcagcactttatgctgttcagcgatgagaacatgatgcttgaagcacaagctaaa
gaagaaaccaaagaggttgacgaggaaatcctgcacatgcgcaagatcctgaaaactgaa
ctggttgatcttgacctttctgtacgtgcattgaattgccttaaagctgctgatattcgc
agcctggccgatttagtatcgtacgatgttgccgatatgctgaagttcagaaactttggt
aaaaagtcattaactgaaatccaggacctggttaaatcaaaaggtttatcttttggtatg
aatctgtctaaatttaagttagacgaagaataa
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