Mucilaginibacter sabulilitoris: SNE25_30500
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Entry
SNE25_30500 CDS
T09599
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msab
Mucilaginibacter sabulilitoris
Pathway
msab03420
Nucleotide excision repair
msab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SNE25_30500
03430 Mismatch repair
SNE25_30500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msab03400
]
SNE25_30500
Enzymes [BR:
msab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SNE25_30500
DNA repair and recombination proteins [BR:
msab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SNE25_30500
MMR (mismatch excision repair)
Other MMR factors
SNE25_30500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
Dna2
Motif
Other DBs
NCBI-ProteinID:
WPU93651
LinkDB
All DBs
Position
complement(7231313..7234483)
Genome browser
AA seq
1056 aa
AA seq
DB search
MQSNLNKYNEKFQAALAGLNPEQLAAVNTMDGPVLVVAGPGTGKTQILAARIGKILTDTD
ALPSEILCLTYTDAGAVAMRKRLFEFIGPDAYRINIYTFHAFCNEIIQENLEYFGKLNLE
SLSDLESAMLFRELVDEFDNGHLLKRFTGDIYYDTKRLKDLFSTMKRENWDADMIARAVQ
EYLDDIPNREEFFYKRANAKTGIKVGDPKQKDIDAVHETMSKLLAAVDEYKNYDAKMKTR
GRYDYDDMIIWVLRAFANNEEILRKYQERYQYILVDEFQDTSGSQNELLRFLLNYWDVPN
VFVVGDDDQSIFKFQGANMKNILDFANDYVDTLHTVVLKHNYRSNQHILDISKALINNNF
ERLTSQLKLDKDLRASHGRFAELTVEPVINEYENPDQELVDVSAQIKQLVNGGVPPGEIA
VIYRNHSQVEEMIKFLDIQKIAVNTKRKIDILTQPFGEKIINILRYLAMEIDSPYSGDEL
LFEIMHYDFFNIAPIEIAKASIAVAKENYGAINNNKPKTSLRRYLSELRPPAQPDLFAPD
RFTAMKYLINDIDELIKSALSVTLQQFFQNVIAKMGILRYIMQQTDKGGHMQMLTSFFDF
LKDESRKNPEIKLADLIATIELMKKNGIRLDLNQVIFSDNGVNFLTAHGSKGLEFEHVFF
IGCDKRTWDSKGRNSGFSYPDTLTQSTSDDIAQKEEARRLFYVAVTRAKQHLVISYANKD
KKSKDQEASQFIGEILASTDLQVRYPKVTETAMLDFYVTQFSEAEKPQIELLDKNYINQL
LQNYTLSVTHLSNYLDCPLRFYFQCLIRVPSGKSPSATFGQAVHWALNKTYRLLKDNDNE
FLSTEQFMNEFRWYMARNRDSFTKEEFKLRVAYGEKILPLYYEQNVNNWNKVAITERTIK
NIEIEGVPIKGNLDKMEFDGKHVTVVDYKTGKLKNAKDKLLRPTNDAPNGGDYWRQGVFY
KILVDHDRTNDWEVVSTVFDFVEPVSEGEYHREKFVITPEDMEIVTGQIKDTYAKIMAHD
FNTGCGKKECDWCHFVKSNFKQADDILGIVSEEEEE
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgaaccttaataagtataacgagaaatttcaggcggctttagccggattaaat
ccagaacagctggccgcggtaaatacaatggatggcccggtactggtagtagccggaccg
ggtaccggtaaaacgcagatactggctgcccgcataggcaaaatactaaccgacactgat
gccctgccgagcgaaatactttgccttacctataccgatgccggcgcggtggccatgcgc
aaacgtctgtttgagtttattggccctgatgcttaccgcattaacatatacactttccac
gctttttgtaacgagatcatccaggaaaacctggagtatttcggcaagcttaacctcgag
tcgctgtcagatttggaatcggctatgctgttccgcgaactggttgatgagtttgataac
ggccatttgcttaagcgcttcaccggcgatatttattacgatactaaacggctgaaagac
ctgttctcgaccatgaagcgggagaactgggacgcggatatgattgcacgcgctgttcag
gagtatctggatgatatccccaaccgcgaggagtttttttacaaaagggccaatgccaaa
accggtataaaagtaggcgatcctaagcaaaaagatatcgacgccgtacatgaaaccatg
agcaaactgctggcagcggtagacgaatacaagaattatgatgccaaaatgaagacccgc
ggtcgttatgattatgatgatatgatcatttgggtgcttcgcgcttttgccaataacgaa
gagatattacgcaaataccaggaacgttatcagtatattttggttgatgaatttcaggat
accagcggttcgcaaaatgagctgctgcggtttttgctcaattactgggatgtacccaac
gtgtttgtagtgggcgatgatgaccagtctatcttcaagtttcagggtgccaacatgaag
aacatccttgattttgctaatgactatgtagatacactgcatacagtggtgctcaaacat
aactaccgctccaatcagcatatcctcgatatttccaaagcgcttatcaacaataatttt
gaacgcttaaccagtcagctaaagctggataaagacttgcgcgcgtcgcatggccgtttt
gcagaactgactgttgaacctgtaataaacgaatacgaaaatcccgatcaggaactggtt
gatgtatcggcgcaaataaaacagctggtaaatggtggtgttcctccgggcgaaatagcg
gtgatctatcgtaaccacagccaggtagaggaaatgatcaaattcctcgacattcagaaa
attgcggtaaataccaaacgaaaaatagacatacttacacagccctttggcgaaaagatc
atcaacatactgcgttacctcgccatggaaattgattcaccctacagcggcgatgagttg
ttgtttgagatcatgcattatgatttctttaatatcgcccccattgaaattgccaaggca
agcatcgcggtagcaaaagaaaattacggcgctatcaataataataaacccaaaacttcg
ctgcgccgctacctcagcgaattacgaccgcctgcccagcctgatctttttgcgcccgac
aggtttacggccatgaaatacctgatcaatgatattgatgaacttataaaatcggcattg
agcgtaacgttgcagcagttttttcagaatgtgatagccaaaatgggcattttgcgctac
attatgcagcaaaccgacaagggcgggcacatgcaaatgctcaccagcttttttgatttt
ttgaaggatgagagccgcaaaaatccggaaattaaactggccgacctgattgccaccatt
gagctcatgaaaaagaacggtatcaggctcgatctgaaccaggttattttctcagacaat
ggcgtaaactttttaacggcccacggctcaaaaggcctggagtttgaacacgtgtttttt
ataggatgcgacaagcgcacctgggacagcaagggccgtaacagcggtttcagctatccg
gatacgctcacgcagtcaacctccgatgatattgcacaaaaggaagaggcccggcggttg
ttttatgtggcggttacccgtgccaaacagcacctagtgatatcctacgccaataaagat
aaaaaatcaaaagatcaggaagcaagtcagtttataggcgaaatacttgcgagtaccgat
ctgcaggtgcgctatccaaaggttaccgaaacagccatgctcgatttttatgtaacccag
tttagcgaagccgaaaagccccagatagaactgctggataaaaactatatcaatcagttg
ctgcaaaactataccctttcggtaacgcatttaagcaattacctggattgcccgttgcga
ttttattttcagtgtttgatcagagtaccgtcaggtaaaagtccgtcggccacgtttggg
caggccgtacactgggcgctgaataaaacttacaggttgctgaaagataacgacaatgag
tttttgtcaactgagcagtttatgaacgagttccgctggtatatggcccgcaaccgggat
tcatttaccaaagaagaatttaaactgcgtgtggcttacggcgaaaagatactgccgctg
tactatgagcaaaatgtaaacaactggaacaaagtagccattaccgagcgcaccattaaa
aatattgaaattgaaggcgtgccgattaaaggtaacctcgacaaaatggaatttgatggc
aagcacgtaaccgtagtggattataaaaccggtaaactcaaaaatgccaaggataaactg
ctgcgccccactaatgatgcccccaacggcggcgattactggcgccagggtgtgttttat
aaaatattggtcgaccatgaccgtactaacgactgggaagtggtaagcaccgtttttgat
tttgtagagcctgtaagcgagggcgagtatcaccgcgaaaaatttgtaataaccccggaa
gatatggaaatagtgaccggacaaattaaagatacgtacgccaaaattatggcccacgac
tttaacaccggctgcggcaaaaaagaatgcgactggtgccattttgtaaaaagtaatttt
aaacaggccgacgatatattagggattgtaagcgaagaggaagaagaataa
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