Mucilaginibacter sabulilitoris: SNE25_30975
Help
Entry
SNE25_30975 CDS
T09599
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
msab
Mucilaginibacter sabulilitoris
Brite
KEGG Orthology (KO) [BR:
msab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msab03009
]
SNE25_30975 (rimO)
Enzymes [BR:
msab01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SNE25_30975 (rimO)
Ribosome biogenesis [BR:
msab03009
]
Prokaryotic type
ribosomal protein modification factors
SNE25_30975 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WPU93744
LinkDB
All DBs
Position
complement(7353918..7355252)
Genome browser
AA seq
444 aa
AA seq
DB search
MKTKEIYQPKKIVKPRVNVVTLGCSKNIYDSEILMGQLKGNQFDVVHEADKVNSNDIIVI
NTCGFIDNAKQESIDTILQYSELKDQGKVGKVIVTGCLSERYKPELEAEITNVDAYFGTN
DLQNLLHSVGADYKHELIGERLLTTPSHFAYFKIAEGCNRPCSFCAIPLMRGKHLSTPID
QLVKDAQALVKNGTKELILIAQDLTYYGLDLYGKRNLDELLRRLSDVNGVEWIRLQYAYP
SGFPMEILDVMNERDNICKYMDMPLQHISDNMLKSMRRGITKQKTIDLVNQIRDKVPGIA
MRTTLITGYPGETEQDFEEMQQWVEDTQFDRLGCFTYSHEEKTHAHSLVDDVPDEVKQER
ADAIMEIQQGISFDKNQEKIGHTFKVLVDKKDGDYFVGRTEFDSPEVDNEVLIDASIDYA
TVGSFVNVKVHSAEDFDLYGQIVK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaaagaaatttatcagccaaagaaaatagtaaaaccccgtgttaacgtggtt
actttgggttgctccaaaaacatatatgattctgaaatattaatggggcagttaaaaggc
aaccagtttgatgtagtgcatgaggctgataaagtaaacagtaatgatattattgttatt
aatacttgcggctttatcgataatgccaagcaggaatcaatagataccattttacaatac
agcgaactgaaagatcagggtaaagtgggtaaggtaatcgttaccggttgcctgagcgaa
cgctataagcccgaactggaagctgagataaccaacgtagatgcttactttggtaccaat
gatctgcaaaacctattgcattctgttggggcagattataaacatgaactgattggcgaa
cgcttgctgaccacaccatcgcattttgcctactttaaaattgctgaaggttgtaaccgc
ccatgttcattctgcgctatcccgctgatgcgcggtaagcacctgagtacaccaattgac
cagttggttaaagatgcccaggcattggttaaaaatggcaccaaagaactgatattaatt
gcccaggaccttacctactacggtctggatctgtatggcaaacgtaacctcgacgaattg
ctgcgccgtttatctgatgtaaatggtgtggaatggatcaggttgcaatacgcttaccct
tctggttttcctatggaaatattggatgtgatgaacgagcgcgacaatatctgtaagtat
atggacatgccattgcagcatatcagcgataatatgttgaaatcgatgcgccgtggtatc
accaaacaaaaaaccattgatctggtaaaccagatccgtgataaagtgccgggtattgcc
atgcgtacaactttaataaccggttatccgggagaaaccgaacaggattttgaagaaatg
cagcaatgggtagaagatactcaatttgaccgcctgggttgttttacttattcgcacgaa
gaaaaaacacatgcccattctctggttgatgatgtacctgatgaagtgaagcaagaacgt
gctgatgctattatggaaattcagcagggtatttcgtttgataaaaaccaggaaaagata
gggcatacctttaaagtattggttgataaaaaagacggcgactattttgttggccgaacc
gaatttgattcgcctgaggtggataacgaagttttgattgatgccagcattgactacgca
accgtaggaagctttgttaacgtaaaggtacacagcgcagaagactttgacctttatgga
caaattgtaaaataa
DBGET
integrated database retrieval system
