Micromonospora sagamiensis: GCM10017556_00290
Help
Entry
GCM10017556_00290 CDS
T06946
Name
(GenBank) hypothetical protein
Organism
msag
Micromonospora sagamiensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
WDR55
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
NA-iREase3
Beta-prop_EIPR1
PROPPIN
Beta-prop_WDR19_1st
Pentapeptide
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_WDR75_2nd
eIF2A
NACHT
Cytochrom_D1
WDR54
Pentapeptide_3
Pentapeptide_4
NPHP3_N
AAA_22
nSTAND3
AAA_16
ATPase_2
TrwB_AAD_bind
CHX17_2nd
Motif
Other DBs
NCBI-ProteinID:
BCL12290
LinkDB
All DBs
Position
33300..38276
Genome browser
AA seq
1658 aa
AA seq
DB search
MILHCPDFLAATRSPQAGTRSPRDMVDSLLDQLNSSEAPRPPDLVMVTGNLAERATPAEY
EMAHQTLGALRDALGIDHRRIVLVPGSSDVNRLKCHAYFLQCAADEEQPTPPYWEKWQPF
ATMVRRFHGMELPRDQPWTLTEHPDLGVVVAGFNSTMAQTHLPGDEYGHLGAEQIDWFSD
HLSAPARRDWLRVGVLHHRPDGAAGTSGRLADADRFVDALGPHLDLVVHGQPDEPALALL
RPVGVPVVGGGSGGWQLVEVHPGHLRVHTLPGGPCPAGTTGPVPLPYPPPRRAVPLPRHP
DPPAALRRLADQVAEVCRLRHPAADVTLVRQPDSTRVAYLRVSPDSTHGDRGPAEQHPIG
VCAAVPTHDDVGWFVEVLARFRTGSAGRTASLVHVGAATDPRLREWARGRGVALVTFADF
QLGPDLDRFTERQAAVLDSDPVYPSAAYVPQRYTEFLPGARAPSEAPPSTDLLAWLRDWV
DAPRGRLVVVLGTFGHGKTFLLRELARRMRDDGSRTVPVLIDLRGFEKAYSLDELVAVQL
SRHGQRQIDLDAFRYLRREGRVALLFDGFDELATRVSYDRATNHLDTIVQAAEDRAKVIV
TSRDQHFLTDADVLSALGAQLGADRRVVRLADFDDHQILTFLTHQLRDPVRARHRLELLR
DVKDLLGLSRNPRMLGFITELGDESLHVATDAGNPITAADLYRRVLERWLAHETRRLGRL
GPLAPSEADLWEAVTHLALRLWDSPDDSLSLDDLGAAAATLSQLTATAVGETAALEPQES
AHLLGSSTLLVRYGERRFTFVHHSVREWLIANHLAGQLTAGGGAAPGLIGRSMSPLMIDF
LVGLAGRDAMRDWAEQTLAGRSTARGVGRNAVEVLRHLRVATSSPLHMPGFDLRGEDFSA
RFLAGADLAGADLTGARLVGTNLTGANLTEANLTGARLDRATLRDADLTEADLTGARLLG
TDLTGAVLTNVRLRRTALVAATGADGEALRGVDTLGAALPDDTAAEPQIASCAVVHAVAV
ASGVRLLAGGGQDGAIRVWDAGNGMPLRMLTGHTGTVRAVAYPPDGRHLASAGDDETIRI
WDTTTGRTLHTLTGHTGRIRTVAYSPHGRHLASAGDDETIRIWDTTTGRTLHTLTGHTGR
IRTVAYSPHGRHLASAGDDETIRIWDTTTGHTVHTLTGHTGTIHAVGYAPSGDRLASASD
DRRIHVWDVTTRAIVHTMTGHTGWIRALAFSPEGRRLVSAGDDGTIRVWDGGTGQALHTL
TGHGGTVHAVAYYPDGRHLASAGDDETVRVWDTAEGRLSRTVRGGGGDSRALCFSPREGD
PWMAVGSGDGAVRIWSPVVGDQPRVLSEPGGPDAAVTALAVSDDGRYLACAGHDGGIRVW
DPSTAELERTLTGHIGAVRAIAFEPGGCHLASAGIDGTIRMWDVAGHGAVRALAGRYGGV
TAIAFSPDGHYLASAGTDGTVRVWHLGTGRRQVLPGHANTVRALGFSPDGRHLASADEDG
TIRIRGLDAGARPRALAGHEGAVTAIAFSPDGYHLASAGADGAIRIWATASGQLAHTITG
HAGWICSLAYTPDGRHLASAGGDRAVRFWDTTRAGPHAVLVPLAAGGSAVLLDDQRYVLT
GQPHGEYWYAIGMCRFEPGELDPYVPALRPVPSGGRVW
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgcactgcccggacttcctggccgcgacgcgttccccgcaggccggcacacgg
tcaccgcgcgacatggtcgactccctgctcgaccagctgaattcctcggaggcaccgcgt
ccgccggatctggtgatggtcacgggcaatctcgccgaacgcgccaccccggcggaatac
gagatggcacaccagaccctgggcgccctgcgggacgcgctcggcatcgatcaccgccgg
atcgtgctggtcccgggcagcagcgacgtcaaccgcctcaagtgccacgcctactttctc
cagtgcgccgccgacgaggaacagccgacgccgccgtactgggagaagtggcagccgttc
gccacgatggtccgccggttccacggcatggaactgccccgggaccaaccctggaccctc
accgagcaccccgacctgggtgtcgtcgtcgccggtttcaactccacgatggcccagacc
cacctacccggcgacgagtacggccacctgggcgcggagcagatcgactggttctccgac
cacctgtccgcgcccgcccggcgggactggctgcgggtcggcgtgctgcaccaccggccg
gacggtgccgccggcaccagcggtcggctcgccgacgccgaccggttcgtcgacgcgctc
ggcccgcacctggacctggtggtgcacggccagccggacgagcccgcgctcgccctcctg
cgccccgtcggcgtgccggtggtcggcggcgggagtggcggctggcaactcgtcgaggtg
cacccgggccacctgcgggtacacacgctgcccggcggtccgtgtccggccggcaccacc
gggccggtcccgctcccgtacccgccgccgcgccgggcggtgccccttccccgccacccg
gacccaccggcggcgctgcgccggctggcggaccaggtcgcggaggtctgccgcctgcgc
catccggcggccgacgtcaccctggtccggcagcccgactcgacgagggtcgcctatctg
cgcgtctcccccgactccacgcacggcgaccgggggccggcggagcagcatccgatcggg
gtgtgtgccgccgtcccgacccacgacgacgtcgggtggttcgtcgaggtgctggcccgg
ttccgtaccggcagcgccggccggacggccagcctcgtgcacgtcggcgcggcgacggat
ccgcgactgcgcgagtgggcccgcgggcgcggcgtcgccctcgtcaccttcgccgacttc
cagctcggacccgatctcgaccggttcaccgaacgtcaggccgccgtgctggacagcgac
cccgtctatccgtccgccgcctacgtcccgcagcgctacacggagttcctgcccggagca
cgggcaccgtcggaggcaccgccgtccacggatctcctcgcgtggctgcgcgactgggtc
gacgcgccgcgcgggcggctggtggtggtgctgggcacgttcggacacggcaagaccttc
ctgctgcgggagctggcccgccggatgcgcgacgacggttcccgcacggtgccggtgctg
atcgacctgcgcggcttcgagaaggcgtacagcctggacgaactcgtcgccgtgcagctc
tcccggcacggccagcggcagatcgatctcgacgcgttccggtacctgcggcgcgagggc
cgggtggcactgctcttcgacggcttcgacgagttggccacccgggtcagctacgaccgc
gccaccaaccacctggacaccatcgtgcaggcggccgaggaccgggccaaggtcatcgtc
accagccgggaccagcacttcctcaccgacgccgacgtgctgtccgcgctcggggcccag
ctcggcgccgaccgccgggtggtacgcctggccgacttcgacgaccaccagatcctcacc
ttcctcacccaccagctgcgcgacccggtcagggcccggcaccgcctcgaactgctccgt
gacgtcaaggacctgctcgggctgtcccgcaatccgcggatgctcgggttcatcaccgaa
ctgggtgacgagtcactgcacgtcgcgacggacgccgggaaccccatcaccgccgccgac
ctctaccggcgggtgctcgaacgctggttggcccacgagaccaggcggctcggccgcctc
ggtccgctcgcccccagcgaggcggacctgtgggaggccgtgacccatctggcgctccgg
ctgtgggactcgcccgacgacagcctcagcctggacgacctcggggccgccgcggccacg
ctgtcccagctcaccgccaccgcggtcggtgagaccgccgccctggaaccgcaggagagc
gcccacctgctcgggtccagcacactgctggtccggtacggcgagcgacggttcaccttc
gtccaccactcggtacgcgagtggctgatcgccaaccacctcgccggccagctgaccgcc
gggggtggcgccgcccccggtctgatcggccggtccatgtccccgctcatgatcgacttc
ctggtcggcctggccggtcgcgacgccatgcgcgactgggcggaacagacgctggccggc
cggtccaccgcgcgcggggtgggacgcaacgccgtggaggtcctccggcacctgcgggtg
gccacctcctcgcccctgcacatgcccggcttcgacctgcgcggggaggacttctccgcc
cggttcctcgcgggcgccgacctcgctggggccgacctgaccggcgcgaggctggtgggc
accaacctcaccggggccaacctgaccgaggccaacctcaccggggcccgcctggaccgg
gccacgctgcgcgacgccgacctcaccgaggccgacctgaccggggcgaggctgctcggc
acggacctcaccggcgcggtcctcaccaacgtgcggctacgccggaccgccctggtggcg
gcgaccggagccgacggcgaggcactgcggggcgtcgacacactcggtgccgccctgccc
gacgacaccgccgccgaaccccagatcgcctcctgcgccgtcgtgcacgccgtcgcggtg
gcctccggcgtacggctgctggccggcgggggccaggacggcgccatccgggtgtgggac
gccggcaacggaatgccgctgcggatgctgaccgggcacaccgggacggtgcgggccgtc
gcctacccgcccgacggccggcacctggccagcgccggggacgacgagaccatccgcatc
tgggacaccaccaccggccgtaccctccacaccctcaccggccacaccggacgcatccgc
accgtcgcctacagcccacacggccgacacctcgccagcgccggagacgacgagaccatc
cgcatctgggacaccaccaccggccgtaccctccacaccctcaccggccacaccggacgc
atccgcaccgtcgcctacagcccacacggccgacacctcgccagcgccggagacgacgag
accatccgcatctgggacaccaccaccggccacaccgtccacaccctcaccggccacacc
ggcacgatccacgccgtcgggtacgcgccctccggcgatcggctggccagcgccagtgac
gaccggcgcatccacgtgtgggacgtgaccacccgcgccatcgtccacaccatgaccggt
cacaccggttggatccgcgctctcgccttctcccccgaggggcggcgactggtcagtgcc
ggcgacgacggcaccatccgggtctgggacggtggcaccggccaggcactgcacaccctc
accggccacggcggcaccgtccacgccgtcgcctactacccggacggtcggcatctggcc
agcgcgggcgacgacgagacggtccgggtgtgggacaccgccgagggcaggttgtcgcgc
accgtccggggcggcggcggtgactcccgcgcgctgtgcttctcgccccgggagggcgat
ccgtggatggcggtcggttcgggcgacggcgcggtacggatctggagccccgtggtcggc
gaccagccccgcgtgctcagcgaaccgggcggccccgacgccgccgtcaccgcgctcgcc
gtctccgacgacggccgctacctcgcctgcgccggccacgacggcggcatccgggtctgg
gaccccagcacggcggaactcgaacggacgttgaccgggcacatcggggcggtgcgcgcg
atcgccttcgagccgggtgggtgccacctggccagcgccggcatcgacggcacgatccgg
atgtgggacgtcgcgggtcacggtgcggtccgtgccctcgccgggcggtacggcggggtc
accgccatcgcgttctcgccggacgggcactacctggccagcgccggcacggacggcacg
gtccgggtgtggcatctcggcaccggtcgacggcaggtcctgcccgggcacgccaacacc
gtccgggcgctcggcttctcgcccgacgggcgtcatctggccagcgcggacgaggacggg
acgatccggatccggggcctcgacgccggagcacggccgcgcgcgctcgccggacacgag
ggtgcggtcaccgccatcgccttctccccggacggttaccacctggccagtgccggagcc
gacggcgccatccggatctgggccaccgccagcggccagctcgcccacacgatcaccggc
cacgccggttggatctgctcgctggcctacaccccggacggccgtcacctggccagtgcc
ggcggcgatcgtgccgtccggttctgggacaccacacgtgccggaccgcacgcggtgctc
gtgccgctggccgccggcggctcggccgtcctgctcgacgaccaacggtacgtcctgacg
gggcagccgcacggcgagtactggtacgccatcgggatgtgccggttcgagccgggcgaa
ctcgacccgtacgtcccggcgctacgcccggtcccctccggcgggcgggtctggtga
DBGET
integrated database retrieval system