Micromonospora sagamiensis: GCM10017556_00620
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Entry
GCM10017556_00620 CDS
T06946
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msag
Micromonospora sagamiensis
Pathway
msag00040
Pentose and glucuronate interconversions
msag01100
Metabolic pathways
msag02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GCM10017556_00620
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM10017556_00620
Enzymes [BR:
msag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GCM10017556_00620
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
BCL12323
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Position
80730..82298
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AA seq
522 aa
AA seq
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MRRPVVLHLSAVLATAATGAAIAVALPTPQASAAVGSATGYATQNGGTTGGAGGQTVRAT
TGTAIHAALCTRASSSTPIVIQVEGTINHGNTSKVSGGSCSTADGVIELKQISNVTIVGV
GGGAVFDQLGIHIRDSRNIIIQNVTIRNVKKSGSPTSNGGDAIGMESNVRNVWVDHVTLE
ASGGESEGFDGLFDMKDNTQYVTLSYSILRNSGRGGLVGSSESDLSNGFITYHHNLYENI
DSRTPLLRGGIAHVYNNHYVSLHESGINSRAGARAKVDNNYFRNSKDVLGTFYTSERGYW
QVSGNIFDNVTWSAPGTDNYPAGPNPQSNTTVSIPYPYSLDGAGCVPDVVRQTAGAHTGL
KVSDGNCSPQTPTPGPTSPTPGPTSPTPGPTSPTPTPTPSSGTNLSIGAGSDGSSKADGT
SYGNVRDGNMSTYWSPVGSTGSISIKWGSATTVSRINIREASGSVGVIGSWRVLNGGTGA
VLASGSGAGVVTFAPTALTKVTFEITSSTGTPRVAEFETYAG
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaccagtcgtactgcacctctcggcggtgctggccacagcggccaccggggcc
gcgatcgccgtggcactgccgacgccccaggcgtcggcggcggtcggcagcgccaccggc
tacgcgacccagaacggtggcaccaccggcggtgccggcgggcagacggtgcgggccacc
acggggaccgcgatccacgccgccctgtgcacgcgggccagcagcagcaccccgatcgtc
atccaggtcgaggggaccatcaaccacggcaacacgagcaaggtgtcgggcggaagctgc
agtaccgccgacggcgtgatcgaactcaagcagatcagcaacgtcaccatcgtcggcgtc
gggggcggggccgtcttcgaccagctcggcatccacatccgcgactcccgcaacatcatc
atccagaacgtgaccatccggaacgtcaagaagtcgggctcgcccacgtccaacggtggc
gacgccatcggcatggagagcaacgtccgcaacgtctgggtcgaccacgtcaccctggaa
gcctcgggtggcgagtcggagggattcgacggcctcttcgacatgaaggacaacacccag
tacgtgacgctgtcctacagcatcctgcgcaactcgggccgtggtggcctcgtcgggtcc
agtgagagcgacctctcgaacggcttcatcacgtaccaccacaacctgtacgagaacatc
gactcccgcacgcccctgctgcgcggcggcatcgcccacgtctacaacaaccactacgtg
agcctccacgagtcgggcatcaactcgcgggccggggcgcgcgcgaaggtggacaacaac
tacttccggaactccaaggacgtcctgggcaccttctacaccagcgaacgcgggtactgg
caggtcagcggcaacatcttcgacaacgtgacctggtccgcccccggcaccgacaactac
cccgccggccccaacccgcagtccaacaccaccgtcagcatcccgtacccctacagcctc
gacggggccggctgcgtgccggacgtcgtccggcagacggccggcgcccacacgggtctg
aaggtgtcggacggcaactgctcgccgcagacgccgacgcccggaccgaccagccccacg
cccggaccgaccagcccgacgcccggaccgaccagcccgacgccgacgccgacgccgtcc
agcggaaccaacctgagcatcggggccggctccgacggctccagcaaggccgacggaacg
agctacggcaacgtgcgggacggcaacatgagcacctactggtcaccggtcggctcgacc
ggttccatctcgatcaagtggggttccgcgaccacggtgtccaggatcaacatccgggag
gcgtccggctccgtcggcgtcatcgggtcctggcgggtcctcaacggcggcaccggcgcc
gtcctggcctccggcagcggggcgggcgtcgtcaccttcgcccccaccgcactgaccaag
gtcaccttcgagatcaccagctcgaccggcacgccgagggtcgccgagttcgagacgtac
gccggttag
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