Micromonospora sagamiensis: GCM10017556_08230
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Entry
GCM10017556_08230 CDS
T06946
Symbol
pdhD
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
msag
Micromonospora sagamiensis
Pathway
msag00010
Glycolysis / Gluconeogenesis
msag00020
Citrate cycle (TCA cycle)
msag00260
Glycine, serine and threonine metabolism
msag00280
Valine, leucine and isoleucine degradation
msag00310
Lysine degradation
msag00380
Tryptophan metabolism
msag00620
Pyruvate metabolism
msag00630
Glyoxylate and dicarboxylate metabolism
msag00640
Propanoate metabolism
msag00670
One carbon pool by folate
msag00785
Lipoic acid metabolism
msag01100
Metabolic pathways
msag01110
Biosynthesis of secondary metabolites
msag01120
Microbial metabolism in diverse environments
msag01200
Carbon metabolism
msag01210
2-Oxocarboxylic acid metabolism
msag01240
Biosynthesis of cofactors
Module
msag_M00009
Citrate cycle (TCA cycle, Krebs cycle)
msag_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
msag_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
msag_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
msag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
GCM10017556_08230 (pdhD)
00020 Citrate cycle (TCA cycle)
GCM10017556_08230 (pdhD)
00620 Pyruvate metabolism
GCM10017556_08230 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
GCM10017556_08230 (pdhD)
00640 Propanoate metabolism
GCM10017556_08230 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GCM10017556_08230 (pdhD)
00280 Valine, leucine and isoleucine degradation
GCM10017556_08230 (pdhD)
00310 Lysine degradation
GCM10017556_08230 (pdhD)
00380 Tryptophan metabolism
GCM10017556_08230 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
GCM10017556_08230 (pdhD)
00670 One carbon pool by folate
GCM10017556_08230 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msag04147
]
GCM10017556_08230 (pdhD)
Enzymes [BR:
msag01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
GCM10017556_08230 (pdhD)
Exosome [BR:
msag04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
GCM10017556_08230 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
HI0933_like
FAD_oxidored
AlaDh_PNT_C
FAD_binding_2
DAO
NAD_binding_8
3HCDH_N
Thi4
2-Hacid_dh_C
Amino_oxidase
Lycopene_cycl
Trp_halogenase
Methyltransf_17
Motif
Other DBs
NCBI-ProteinID:
BCL13084
LinkDB
All DBs
Position
1008090..1009550
Genome browser
AA seq
486 aa
AA seq
DB search
MTEASMPFSWHDPRSSDATWELSVSEPNDATFDVVILGGGSGGYAAALRAAQLDLKVALI
EKGKLGGTCLHNGCIPTKALLHAAEIADNTRESEQFGVKAELVGIDMAGVNSYKDGVIAR
LYKGLQGLVGSSKNITFVSGAGRLVGPNVVEVDGKRYTGRNVVLATGSYARSLPGLEVDG
ERVITSDHALTLDRVPASAIVLGGGVIGVEFASVWKSFGVDVTIIEALPRLVAAEDEESS
KALERAFRKRKINFKVGKPFEKVEKTEKGVKVTISGGETVEAELLLVAVGRGPVTADLGY
EEQGVKIDRGYVLTDERLRTGVPNVYAVGDIVPGLQLAHRGFQQGIFVAEEIAGLNPAVI
DEAGIPRVTYCDPELASVGLTEAKAKEQYGADKIKTYNYNLGGNGKSQILKTTGFVKLVR
VEDGPVVGVHMVGARVGELIGEAQLIYNWEAYPAEVAQLVHAHPTQNEALGEAHLALAGK
PLHAHA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggcgagtatgcccttttcctggcatgaccctcgtagcagcgacgcgacctgg
gagttgagtgtgagcgagccgaacgacgcgaccttcgacgttgtcatcctcggaggaggc
agtggcggctatgcggcggcgctgcgcgccgcccagctggacctcaaggtcgcactgatc
gagaagggcaagctcggcgggacctgcctgcacaacggctgcatcccgaccaaggccctg
ctgcacgcggccgagatcgccgacaacacccgcgagtcggagcagttcggcgtcaaggcc
gagctggtcggcatcgacatggccggggtcaactcgtacaaggacggcgtcatcgcccgc
ctgtacaagggcctccagggcctggtcggcagctcgaagaacatcaccttcgtgtcgggg
gccggccgcctggtcgggccgaacgtcgtcgaggtcgacggcaagcgctacaccggccgt
aacgtcgtgctggccaccggctcgtacgcccgcagcctgcccggcctggaggtcgacggc
gagcgggtgatcaccagtgaccacgcgctgaccctggaccgggtgcccgcgtcggcgatc
gtgctcggcggcggcgtgatcggcgtcgagttcgccagcgtctggaagtccttcggggtg
gacgtgacgatcatcgaggcgctgccccggctggtcgccgccgaggacgaggagtcgtcg
aaggcgctggagcgggcgttccgcaagcggaagatcaacttcaaggtcggcaagcccttc
gagaaggtcgagaagaccgagaagggcgtcaaggtcaccatctccggcggcgagaccgtc
gaggccgagctgctgctcgtcgccgtcggccgcggcccggtcaccgccgacctcgggtac
gaggagcagggcgtcaagatcgaccgcgggtacgtgctgaccgacgagcggctgcgcacc
ggtgtgccgaacgtctacgcggtcggcgacatcgtccccggtctccagctggcgcaccgc
ggcttccagcagggcatcttcgtcgccgaggagatcgccggcctgaaccccgccgtgatc
gacgaggcgggcatcccccgggtcacctactgcgacccggagctggcgtcggtcggtctc
accgaggccaaggccaaggagcagtacggggcggacaagatcaagacctacaactacaac
ctgggtggcaacggcaagagccagatcctcaagaccacgggcttcgtcaagctggtccgg
gtcgaggacggaccggtggtcggcgtgcacatggtcggcgcccgggtcggtgagctgatc
ggcgaggcgcagctcatctacaactgggaggcctacccggccgaggtggcgcagctcgtg
cacgcccacccgacgcagaacgaggccctcggcgaggcgcacctcgccctggcgggcaag
ccgctgcacgcgcacgcctga
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