Micromonospora sagamiensis: GCM10017556_15400
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Entry
GCM10017556_15400 CDS
T06946
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msag
Micromonospora sagamiensis
Pathway
msag03420
Nucleotide excision repair
msag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GCM10017556_15400
03430 Mismatch repair
GCM10017556_15400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msag03400
]
GCM10017556_15400
Enzymes [BR:
msag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCM10017556_15400
DNA repair and recombination proteins [BR:
msag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GCM10017556_15400
MMR (mismatch excision repair)
Other MMR factors
GCM10017556_15400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BCL13801
LinkDB
All DBs
Position
complement(1860917..1863076)
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AA seq
719 aa
AA seq
DB search
MGVHSAAEQVLAGLDPEQRTAVTAPAGPVCVLAGAGTGKTRAVTSRIAHRALTGAISPRH
VLAVTFTARAAAEMRARLTALGVAGVQARTFHAAALRQMRYFAPRLLHGRALPELLDSKV
RLVTLAAARAGLRTDRAAARDLAGEIEWAKSSLVEPGEYVVAAAKAQRDTPHEPAKVAEV
FAAYETVKRANGVIDFEDLLRAAVWGIEEHPDVAEQIRAQYRHFVVDEYQDVNPLQQRLL
DAWLGGRDDLTVVGDASQTIYSFTGATSAYLVDFPRRHRGATVVRLVRDYRSTPQVVGLA
NAVIAQARGSEARLRLELVGQRPTGPEPELRIFTDEPTEATAVAARCRQLVTAGTPAREI
AVLFRTNAQSEAYEKALTEAGVPYVVQGAERFFERVEVRQAMVALRAATRSIPGETPLPA
AVVEALAAVGWAPDAPPAGGAVRERWEALAALVQLAEEYAATPPVLPIGEGAAVERPVTL
AAFTEELHRRAAQQHVPTVDGVTLASLHSAKGLEWDAVFLVGLAEGTLPTGYAKTPEQVE
EERRLLYVGITRARQWLWLSYASARSPGGRNRRPSRFLPQLDRSGGSERAGAGPVPRAER
RRNVVVSCRICGATLLAGGDRKLGRCPTCPSDVDEDLLERLRDWRQRVAGAQRVPAYVVF
TDATLTALAERRPGRPEELIAIAGIGPRKLGLYGESVLALVGGATVDAICPKESLENPS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgggggtgcactcagcggcggaacaggtgctggccgggctcgaccccgagcagcggacg
gcggtgaccgcgcccgccgggccggtctgcgtcctggccggcgcgggtaccgggaagacc
cgggcggtcacctcccggatcgcgcaccgggcgctgaccggggcgatctcgccccggcac
gtgctcgcggtgaccttcaccgcgcgggccgccgccgagatgcgcgcccggttgaccgcg
ctgggcgtcgcgggggtgcaggcgcgcaccttccacgccgccgcgctgcgccagatgcgc
tacttcgccccccggctgctgcacggccgggccctgcccgaactgctggacagcaaggtc
cggctggtcaccctggccgccgcccgcgccgggctgcgcaccgaccgggccgccgcccgg
gacctggccggcgagatcgagtgggccaagtcgtccctggtcgagccgggggagtacgtc
gtcgccgcggccaaggcgcagcgcgacaccccgcacgagccggcgaaggtcgccgaggtc
ttcgccgcctacgagacggtcaagcgggccaacggggtgatcgacttcgaggacctgctc
cgggccgccgtctgggggatcgaggagcacccggacgtcgccgaacagatccgggcccag
taccggcacttcgtggtcgacgagtaccaggacgtgaacccgttgcagcagcggctgctg
gacgcgtggctgggcggccgggacgacctcaccgtggtcggcgacgccagccagaccatc
tactcgttcaccggggccacgtcggcgtacctggtcgacttcccccgccgccaccggggc
gcgacggtggtccggctggtccgcgactaccgctccaccccgcaggtggtcgggctggcc
aacgcggtgatcgcccaggcgcgcggcagcgaggcccggctccggctggaactggtcgga
cagcgcccgaccggccccgagccggagctgcggatcttcaccgacgagccgaccgaggcg
acggcggtcgccgcccgctgccggcagctcgtcaccgccggcacgccggcccgggagatc
gcggtgctgttccgcaccaacgcgcagtccgaggcgtacgagaaggcgctcaccgaggcc
ggcgtcccgtacgtggtgcagggggcggaacggttcttcgagcgggtcgaggtgcggcag
gcgatggtggcgctgcgggcggccacccgctcgatccccggggagaccccgctgccggcc
gccgtggtcgaggcgctcgccgcggtcggctgggccccggacgcccccccggccggcggc
gcggtgcgggaacgctgggaggcgctggccgctctggtccagctcgccgaggagtacgcg
gccaccccaccggtgctgccgatcggcgagggcgcggcggtcgaacggccggtcaccctc
gccgccttcaccgaggaactgcaccggcgggccgcccagcagcacgtgcccaccgtcgac
ggggtcacgttggcctccctgcactcggccaagggactggagtgggacgcggtcttcctg
gtcgggctcgccgagggcaccctgccgaccgggtacgcgaagacccccgagcaggtcgag
gaggagcggcggctgctgtacgtcggaatcacccgggcccggcagtggctctggctgtcg
tacgcctcggcccgctcgccgggtgggcggaaccggcgtccctcacgtttcctgccgcag
ctcgaccgctccggcggatccgaacgggccggcgccggtccggttccgcgcgccgagcgt
cgccggaacgtggtggtctcctgccggatctgcggggcgaccctgctcgccgggggcgac
cgcaagctcggtcgctgtccgacgtgtccgtccgacgtggacgaggacctgctggaacgg
ctccgggactggcggcagcgggtggccggcgcgcaacgggtaccggcgtacgtggttttc
accgatgcgaccctgaccgccctggccgaacgacgaccgggccgccccgaagagttgatc
gctatcgccggaatcggcccccgcaaactgggcctctacggtgaatccgtgctggccctg
gtgggtggcgcgacggtcgacgcgatctgcccgaaagaaagtttggaaaacccgtcgtaa
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