Micromonospora sagamiensis: GCM10017556_17470
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Entry
GCM10017556_17470 CDS
T06946
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
msag
Micromonospora sagamiensis
Pathway
msag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GCM10017556_17470 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msag03021
]
GCM10017556_17470 (rpoA)
03400 DNA repair and recombination proteins [BR:
msag03400
]
GCM10017556_17470 (rpoA)
Enzymes [BR:
msag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GCM10017556_17470 (rpoA)
Transcription machinery [BR:
msag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GCM10017556_17470 (rpoA)
DNA repair and recombination proteins [BR:
msag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GCM10017556_17470 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
BCL14008
LinkDB
All DBs
Position
complement(2094327..2095349)
Genome browser
AA seq
340 aa
AA seq
DB search
MLISQRPTLSEESINETRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKIDGVL
HEFTTIPGVKEDVVELVMNIKELCVSSEHDEPVSMYLRKQGPGDVTAGDIQPPAGVSVHN
PDLKLATLNGKGRLDMELTVERGRGYVTAAQNKQAGAEIGRIPVDSIYSPVLKVTYRVEA
TRVEQRTDFDRLIIDVETKPSMGPRTALASAGSTLVELFGLARELDETAEGIDIGPSPQD
AQLAADLALPIEELDLTVRSYNCLKREGINTVGELIGRTEADLLDIRNFGQKSIDEVKMK
LAGMGLGLKDSAPNFDPAHVVDTFGEADYDTDDYRETEQL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcagccagcgaccgaccctctccgaagagtcgatcaacgagacccggtcccgg
ttcaccatcgagccgctggagcccggcttcggctacaccctgggcaactcgctgcggcgt
acgctgctgtcgtccatcccgggtgcggcggtgacctcgatcaagatcgacggcgtgctg
cacgagttcaccacgatccccggtgtcaaggaggacgtggtcgagctcgtcatgaacatc
aaggagctctgcgtcagctccgagcacgacgagccggtcagcatgtacctgcgcaagcag
ggtccgggcgacgtgaccgcgggtgacatccagcccccggccggcgtctcggtgcacaac
ccggacctgaagctcgccaccctcaacggcaagggccggctcgacatggagctgaccgtc
gagcggggtcgcggctacgtcaccgcggcgcagaacaagcaggccggcgcggagatcggc
cggatcccggtcgactcgatctactcgccggtcctgaaggtcacctaccgcgtcgaggcg
acccgggtcgagcagcggaccgacttcgaccggctgatcatcgacgtcgagaccaagccg
tcgatggggccgcgtaccgcgctggcctccgccggttcgacgctggtggagctcttcggc
ctggcccgggagctggacgagaccgccgagggcatcgacatcgggccgtccccgcaggac
gcccagctcgcggcggacctggccctgccgatcgaggagctggacctcaccgtccgctcc
tacaactgcctcaagcgcgagggcatcaacaccgttggtgagctgatcgggcgcaccgag
gccgaccttctcgacatccgcaatttcggtcagaagtcgatcgacgaggtcaagatgaag
ctcgccgggatggggctgggcctgaaggactccgcgcccaacttcgacccggcgcacgtc
gtggacaccttcggcgaggctgactacgacaccgacgactaccgcgagaccgagcagctg
taa
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