Micromonospora sagamiensis: GCM10017556_23770
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Entry
GCM10017556_23770 CDS
T06946
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
msag
Micromonospora sagamiensis
Pathway
msag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GCM10017556_23770 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msag03400
]
GCM10017556_23770 (xthA)
Enzymes [BR:
msag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
GCM10017556_23770 (xthA)
DNA repair and recombination proteins [BR:
msag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GCM10017556_23770 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BCL14638
LinkDB
All DBs
Position
complement(2782320..2783123)
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AA seq
267 aa
AA seq
DB search
MLSILTLNIQATSQRRAEPLLRWLTARPEQILLLTETSGGDGSAYLLDQFRRAGCHVLHP
PLPGDRGAAMISRVPVTDRPDITAGLSIPGRAVAATVHTDPPVTVLGIYVPSSDRAPAKV
ERKRAFLASLIDTLDRLTADERAHLVLGGDYNVIPRDHQPPYPGVWLPFEYALFDALADA
GLTDAHHHLTPGTPQHSWFGRAGNGYRFDYLHVGDALRDRLRDGDYLQEPREQRLTDHAA
VTLNLDLPVGTLDVRPLPAVAEPATLF
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgttatcgatcctgaccctgaacatccaagccacctcccagcggcgcgccgaaccactg
ctgcgatggctcaccgcccgccccgagcagatcctcctgctcaccgaaaccagcggcggc
gacggcagcgcctacctactcgaccagttccgccgcgccggctgccacgtactacacccg
cccctgcccggcgaccgcggcgcggccatgatcagccgcgtaccggtcaccgaccgcccg
gacatcaccgccggactcagcatccccggccgggccgtcgccgccaccgtccacaccgac
ccacccgtcaccgtcctcggcatctacgtgccctccagcgaccgcgcccccgccaaggtc
gaacgaaagagggcgttcctcgcctccctcatcgacaccctcgaccgcctgaccgccgac
gagcgggcgcatctggtgctcggcggggactacaacgtcatcccccgcgaccaccaaccg
ccctaccccggagtgtggctgccattcgagtacgccctgttcgacgccctcgccgacgcc
ggcctcaccgacgcccaccaccacctcacccccggcaccccacagcacagctggttcggc
cgggccggcaacggctaccgcttcgactacctccacgtcggcgacgccctacgcgaccgg
ctccgggacggcgactacctgcaggaaccccgcgaacagcgcctcaccgaccacgccgcg
gtcaccctgaacctcgacctgcccgtcggcaccctcgacgtgcgccccctgccagcggtg
gccgagccggcgacccttttctag
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