Micromonospora sagamiensis: GCM10017556_30170
Help
Entry
GCM10017556_30170 CDS
T06946
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msag
Micromonospora sagamiensis
Brite
KEGG Orthology (KO) [BR:
msag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msag03032
]
GCM10017556_30170 (topA)
03400 DNA repair and recombination proteins [BR:
msag03400
]
GCM10017556_30170 (topA)
Enzymes [BR:
msag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GCM10017556_30170 (topA)
DNA replication proteins [BR:
msag03032
]
Prokaryotic type
DNA Topoisomerases
GCM10017556_30170 (topA)
DNA repair and recombination proteins [BR:
msag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GCM10017556_30170 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
MarR_2
Toprim_2
HC2
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
BCL15278
LinkDB
All DBs
Position
3444576..3447398
Genome browser
AA seq
940 aa
AA seq
DB search
MPSNARTTRLVIVESPAKAKTISGYLGPGYVVEASFGHVRDLPRNAADVPAKYKGEPWAR
LGVDVDNGFHALYVVSADRKQQITKLIRLAKEVDEILLATDEDREGEAIAWHLVETLKPR
VPVKRMVFHEITKPAIQAAVANPREIDRALVDAQEARRILDRLYGYEVSPVLWKKVMPRL
SAGRVQSVATRIVVERERQRMAFRSAEYWDILATLAVADPGQGPRTFHATLVALNGDRIA
TGKDFEPTTGRVRPGAGVVHLDSSGARGLAARLQGRPFTVTRVEEKPYRRRPYAPFITST
LQQEAARKLRFSSQQTMRTAQRLYENGYITYMRTDSVNLSETAIAAARQQIVELYGERSV
PPEPRRYTGKVKNAQEAHEAIRPAGDNFRTPGDVAKELSGDEFKLYELIWRRTIASQMTD
AVGSSVSVRIRAVSSAQEEADFGATGKTITDPGFLRAYVESSDDENAEAEDAERRLPNLV
KDQPLTADELAAQGHHTQAPSRYTEASLVKALEELGIGRPSTYASIMQTIQDRGYVVKRG
QAMIPSFLAFAVIGLMERHYPRLIDYDFTASMENELDEIAGGDHAAVDFLTAFYFGSTNG
AGDQDIARSGGLKKLVTENLTEIDARSVNSIPLFTDDEGREVVVRVGRYGPYLQRAVPGE
APAGPAEGEEGGTPGDRAPIPEGLAPDELTPEKVHELFLGGGGERKLGDDPATGEPILLK
SGRFGPYVASGERKSSLLRSQSPDTLTFDEALKLLSLPRLVGVGPGGEVFANNGRYGPYV
KQGEEFRSLDSEEKMFTVTLDEALALLAAPKGRQRRAAAPPLREMGVDPSTEKPLVIKDG
RFGPYVTDGETNASLRRGQTPEALTIEEASEMLAEKRAKGPAPKKTAKKATAAKKAPAAK
KATATKKATAAKSTATKKATPAKKAPAKKAAPRKAAADAE
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
gtgccgagcaacgccaggaccacccgtctggtcatcgtcgagtcaccggcgaaggccaag
acgatctcgggctacctcggcccgggatacgtcgtggaggccagcttcgggcacgtccgc
gacctgccccgcaacgccgccgacgtgccggccaagtacaagggcgagccctgggcccgg
ctcggggtggacgtcgacaacggcttccacgccctctacgtggtctccgccgaccggaag
cagcagatcaccaagctgatccggctggccaaggaggtcgacgagatcctcctcgccacg
gacgaggaccgcgagggcgaggcgatcgcctggcacctggtggagacgctcaagccccgg
gtgccggtcaagcggatggtcttccacgagatcaccaagccggcgatccaggcggcggtg
gccaacccgcgcgagatcgaccgagccctggtcgacgcccaggaggcccggcggatcctc
gaccggctctacggctacgaggtctccccggtgctctggaagaaggtcatgccgaggctc
tcggcgggccgggtccagtcggtggccacccggatcgtggtggagcgcgagcggcagcgg
atggccttccgcagcgcggagtactgggacatcctcgccacgctcgcggtggcggacccg
ggccaggggccgcgcaccttccacgccaccctggtcgcgctgaacggcgaccggatcgcc
accggcaaggacttcgagccgaccacgggccgggtccggccgggcgcgggcgtggtccac
ctcgactcgagcggagcacgcgggctcgccgcccgcctccaggggcggccgttcaccgtc
acccgcgtcgaggagaagccctaccgccgccgcccgtacgcgccgttcatcacctccacg
ctccagcaggaggccgcccgtaagctgcgcttctcgtcgcagcagacgatgcgcaccgcg
cagcggctctacgagaacggctacatcacctacatgcgtaccgactcggtgaacctgtcg
gagaccgccatcgcggcggcccgtcagcagatcgtcgagctgtacggcgagcgcagcgtg
ccgccggagccgcgtcgctacaccggcaaggtgaagaacgcgcaggaggcgcacgaggcg
atccgcccggccggggacaacttccgcaccccgggggacgtcgccaaggagctgtccggc
gacgagttcaagctctacgagctgatctggcggcgcaccatcgcctcgcagatgaccgac
gcggtcggctccagcgtctcggtgcgcatccgcgcggtctccagtgcgcaggaggaggcc
gacttcggcgcgaccggcaagaccatcaccgacccgggcttcctgcgggcgtacgtcgag
tcgagcgacgacgagaacgccgaggccgaggacgccgagcgccggctgcccaacctggtg
aaggaccagccgctcaccgccgacgagctggccgcccaggggcaccacacccaggcgccg
tcgcgctacaccgaggcgtcgctggtgaaggcactggaggaactgggcatcggccggccg
tcgacgtacgcgtcgatcatgcagaccatccaggaccgggggtacgtcgtcaagcgcggc
caggcgatgatcccgtcgttcctggcgttcgcggtgatcggactgatggagcggcactac
ccgcgcctgatcgactacgacttcaccgccagcatggagaacgagctggacgagatcgcc
ggtggcgaccacgcggcggtcgacttcctcaccgcgttctacttcggcagcaccaacggt
gccggcgaccaggacatcgcccgctccggcgggctgaagaagctggtcaccgagaacctc
accgagatcgacgcgcgcagcgtcaactccatcccgctcttcactgacgacgagggccgc
gaggtggtcgtacgggtcggccggtacgggccgtacctccagcgggcggtgcccggggag
gccccggcggggcccgccgagggcgaggagggcggcacccccggcgaccgggcgccgatc
ccggaggggctggctcccgacgagctgaccccggagaaggtgcacgagctgttcctcggc
ggcggcggtgagcgcaagctcggcgacgacccggcgaccggggagccgatcctgctgaag
tccggccggttcggcccgtacgtggccagcggcgagcgcaagtcctcgctgctgcgctcg
cagtcgccggacaccctcaccttcgacgaggcgctgaagctgctcagcctgccccggctg
gtcggggtcggcccaggcggtgaggtcttcgccaacaacggccgttacgggccgtacgtg
aagcagggcgaggagttccggtcgctggactccgaggagaagatgttcacggtcaccctg
gacgaggcgctggccctgctcgccgcaccgaagggccgccagcgccgggccgcggcgccg
ccgctgcgcgagatgggcgtcgacccgtcgaccgagaagcccctggtgatcaaggacggc
cggttcggcccgtacgtcaccgacggcgagacgaacgcgtcactgcggcgcgggcagacg
ccggaggcgctgaccatcgaggaggcctccgagatgctcgccgagaagcgggcgaagggg
ccggcgccgaagaagaccgcgaagaaggccacggcggcgaagaaggctcccgccgcgaag
aaggccacggcgaccaagaaggccaccgccgcgaagagcaccgccacgaagaaggccacc
cccgccaagaaggcaccggcgaagaaggccgcgccgcgcaaggcggccgcggacgcggag
tag
DBGET
integrated database retrieval system
