Micromonospora sagamiensis: GCM10017556_30660
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Entry
GCM10017556_30660 CDS
T06946
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
msag
Micromonospora sagamiensis
Pathway
msag03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msag00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GCM10017556_30660
09124 Replication and repair
03420 Nucleotide excision repair
GCM10017556_30660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msag03021
]
GCM10017556_30660
03400 DNA repair and recombination proteins [BR:
msag03400
]
GCM10017556_30660
Enzymes [BR:
msag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCM10017556_30660
Transcription machinery [BR:
msag03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GCM10017556_30660
DNA repair and recombination proteins [BR:
msag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GCM10017556_30660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
BCL15327
LinkDB
All DBs
Position
complement(3493606..3495285)
Genome browser
AA seq
559 aa
AA seq
DB search
MSGGPLIVQSDKTLLLEIDHPDAQACRMAIAPFAELERSPEHVHTYRLTPLGLWNARAAG
HDAEGVVDALLKYSRYPVPHALLVDVAETMDRYGRLQLANDPVHGLVLRALDRLVLIEVA
KSKKLAGMLGAKLDDDTIAVHPSERGRLKQALLKLGWPAEDLAGYVDGEAHPIELAEAGK
DGGKPWTLRSYQRAAVEAFWAGGSGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTVAG
RQWKRELVARTSLTEDEIGEYSGERKEIRPVTIATYQVLTSRRGGAFTHLDLFGARDWGL
VIYDEVHLLPAPIFRFTADLQARRRLGLTATLVREDGREGDVFSLIGPKRFDAPWKDVEA
QGWIAPALCTEVRVTLTDAERLAYATAESEERYRMAATARTKLPVVRALVQRHPDEQVLV
IGGYIDQLHQLGEYLDAPIVQGSTTNKERERLFDAFRSGEIRTLVISKVGNFSIDLPEAA
VAIQVSGTFGSRQEEAQRLGRVLRPKADGRQAHFYTVVSRDTIDTEYAAHRQRFLAEQGY
AYTIVDADDVLGPSLPSFD
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggtggaccactgatcgtgcagtcggacaagaccctgctgctggagatcgaccac
ccggacgcccaggcctgccggatggccatcgcgcccttcgcggagctggagcgctccccc
gagcacgtgcacacctatcggctcaccccgctcgggctgtggaacgcccgtgccgccggg
cacgacgccgagggtgtggtcgacgccctgctgaagtactcccgctaccccgtgccgcac
gcgttgctggtcgacgtggccgagaccatggaccggtacggccggcttcagctcgccaac
gatccggtgcacgggctcgtgctgcgggcgctggaccggctggtgctgatcgaggtcgcc
aagagcaagaagctcgccgggatgctcggcgcgaagctcgacgacgacacgatcgcggtg
catccctccgagcggggtcgactcaagcaggcgctgctcaagctcggctggccggccgag
gacctggccgggtacgtcgacggcgaggcgcacccgatcgagctggccgaggccggcaag
gacggcgggaagccgtggacgctgcggtcgtaccagcgggcggcggtggaggcgttctgg
gccggcggatcgggtgtggtcgtgctgccctgcggcgcgggcaagaccctggtcggggcg
gcggcgatggccgaggcgaaggcgaccacgctgatcctggtcaccaacacggtcgccggc
cggcagtggaagcgcgagctggtcgcccgcacctcgctgaccgaggacgagatcggcgag
tactccggcgagcgcaaggagatccgcccggtcaccatcgccacgtaccaggtgctcacc
tcgcggcgcggcggcgcgttcacccacctcgacctgttcggagcccgcgactggggcctg
gtcatctacgacgaggtgcacctgctgcccgcgccgatcttccggttcaccgccgacctc
caggcccgtcgccggctcggcctcaccgccacgctggtccgggaggacggccgggagggc
gacgtgttcagcctgatcggcccgaagcggttcgacgcgccgtggaaggacgtcgaggcg
cagggctggatcgccccggcgctctgcaccgaggtacgggtcaccctgaccgacgccgag
cgtctggcctacgcgaccgccgagagcgaggagcgctaccggatggcggcgaccgcacgg
accaagctgccggtggtccgcgcgctcgtgcagcggcacccggacgagcaggtgctggtg
atcggcggctacatcgaccagctccaccagctcggcgagtacctcgacgcgcccatcgtg
cagggctcgaccaccaacaaggagcgggagcggctcttcgacgccttccgctccggcgag
atccggacgctggtcatctcgaaggtcggcaacttctccatcgacctgccggaggcggcg
gtggcgatccaggtctccggcacgttcggctcccggcaggaggaggcgcagcggctcggc
cgggtgctccgccccaaggccgacggccggcaggcgcacttctacacggtggtctcccgg
gacaccatcgacaccgagtacgccgcccaccggcagcgcttcctcgccgagcaggggtac
gcgtacacgatcgtcgacgccgacgacgtcctcggcccgtcactcccgtcgttcgactga
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