Micromonospora sagamiensis: GCM10017556_40370
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Entry
GCM10017556_40370 CDS
T06946
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
msag
Micromonospora sagamiensis
Brite
KEGG Orthology (KO) [BR:
msag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msag03016
]
GCM10017556_40370 (truB)
Enzymes [BR:
msag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GCM10017556_40370 (truB)
Transfer RNA biogenesis [BR:
msag03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GCM10017556_40370 (truB)
Prokaryotic type
GCM10017556_40370 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BCL16298
LinkDB
All DBs
Position
4592445..4593338
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AA seq
297 aa
AA seq
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MADVSADGLIVVDKPGGMTSHDVVARIRRLARTRRVGHGGTLDPMATGVLVIGVGRATRL
LTYVIGATKSYTATIRLGQTTVTDDAEGEVTAATSAAGVTDEAIRSALAALTGEIDQVPS
AVSAIKVDGQRAYKRVRDGETVALAARRVTVSRLAVLAVRRDAPDLVDVDVDVTCSSGTY
IRAIARDAGLALGVGGHLTALRRTAVGGFTLDEAATLPELEQRAPDVVPLPLAAAADRFF
PRRDASGDEARVLSHGGPLVAAGIAGPYAVFGPAGELIAIVSEREGRARAEIVLAPA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
ttggccgacgtgagcgcagacggtctgatcgtggtcgacaagcccggtggcatgacgtcc
cacgacgtggtggcacggatccggcggctggcccgcacccggcgggtggggcacggcggc
acgctcgacccgatggccaccggggtgctggtcatcggggtcggtcgggccacccggctg
ctcacgtacgtgatcggcgcgacgaagagctacaccgccaccatccggctcgggcagacc
acggtcaccgacgacgccgagggggaggtcaccgccgccacctccgccgccggggtgacc
gacgaggcgatccggtccgccctggccgccctcaccggcgagatcgaccaggtgccgagc
gcggtcagcgccatcaaggtggacggccagcgggcctacaagcgggtccgggacggcgag
accgtggcgttggccgcgcgccgggtcaccgtctcccggctggccgtgctcgccgtccgg
cgggacgcaccggacctggtcgacgtggacgtcgacgtgacctgctcctccggcacgtac
atccgggccatcgcccgggacgccggcctcgcgctgggcgtcggtgggcatctcaccgcg
ctgcgccggaccgcggtcggcgggttcacgttggacgaggcggcgaccctgccggagctg
gaacagcgggcccccgacgtggtcccgctcccgctcgcggcggcggccgaccggttcttc
ccgcgccgggacgccagcggtgacgaggcccgggtgctctcccacggtggaccgttggtc
gcggccggcatcgccggcccctacgcggtcttcggccccgccggggagctgatcgctatc
gtcagcgagcgggagggccgggcccgcgcggagatcgtgctcgccccggcctga
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