Micromonospora sagamiensis: GCM10017556_42440
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Entry
GCM10017556_42440 CDS
T06946
Name
(GenBank) hypothetical protein
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
msag
Micromonospora sagamiensis
Pathway
msag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GCM10017556_42440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msag03400
]
GCM10017556_42440
Enzymes [BR:
msag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
GCM10017556_42440
DNA repair and recombination proteins [BR:
msag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GCM10017556_42440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
DUF6158
Motif
Other DBs
NCBI-ProteinID:
BCL16505
LinkDB
All DBs
Position
4827820..4828620
Genome browser
AA seq
266 aa
AA seq
DB search
MLRVMTWNIRTGGRDRTGPDRRDRVLRMVDDQRPDVLTLQELRGFEARGVAERFGDAVGM
RAYLARSCFGQPVAVLVRPPWRVLSATPVRRPFHHAAARVTLATAAGPLTVCSAHLDPYC
GLRRLLEAGWLAAALCRAPGDLALLAGDLNTLEPGVDHTARIARLPAEYRRRHLRRDGRT
VETRAVARLHRAGLVDLFTHAGAGEPATAPTAHGGGAEFSGMRLDYLLATPALAGRARGC
RVVRGGETEYASDHYPVVVDLDLTPA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgggtgatgacctggaacatccggaccggcggccgggaccgcaccggccccgac
cgccgggaccgggtgctgcggatggtggacgaccaacggcccgacgtgctcaccctccag
gaactacgcggcttcgaagcgcgtggcgtggcggagcgcttcggcgacgcggtggggatg
cgggcgtacctggcccggagctgtttcggccagccggtcgcggtgctggtgcgtccgccg
tggcgggtgctctccgccaccccggtacgccgaccgttccaccacgccgccgcacgggtc
accctggccaccgccgccgggccgctcaccgtgtgcagcgcccacctggacccgtactgc
gggctgcggcggctgctggaggcgggctggctggccgccgcgctgtgccgggcgccgggg
gacctggcgttgctggccggggacctgaacaccctcgaaccgggcgtcgaccacaccgcc
cggatcgcccggctgccggccgagtaccgccggcggcacctgcgccgcgacgggcggacc
gtggagacccgtgcggtggcccggctgcaccgggccggtctggtggacctgttcacccac
gccggggcgggggagccggcgaccgcgccgacggcacacggcggtggcgcggagttctcc
gggatgcgcctggactacctgctcgccacccccgcgctcgccggccgggcgcggggctgc
cgggtcgtccggggcggcgagaccgagtacgcctccgaccactacccggtggtcgtcgac
ctcgacctcaccccggcctga
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