Micromonospora sagamiensis: GCM10017556_57970
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Entry
GCM10017556_57970 CDS
T06946
Symbol
pel
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msag
Micromonospora sagamiensis
Pathway
msag00040
Pentose and glucuronate interconversions
msag01100
Metabolic pathways
msag02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GCM10017556_57970 (pel)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM10017556_57970 (pel)
Enzymes [BR:
msag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GCM10017556_57970 (pel)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
BCL18058
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Position
6806965..6808311
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AA seq
448 aa
AA seq
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MRIRITGAALVALSLILVPGAVVSAAPDGTSVPRHVERFARQTLPAGDGWAAAGPGTTGG
SAATAEQVHLVRSRADLVRALGGDNATNRTNATPKVIVVDGVVDGFEGPDGDLLDCADLA
DPEYSLPAYLAAYDPAVWGMVPPTGPLEAARVRSVTNQTKQTQINVGPNTTIVGLRGATL
TGLTLMVDTASNVIVRNLTFDDARDCFPAWSPTDGAAGNWNSQYDQISVRRSENVWIDHN
TFTDGDNPDRAQPVHFGRPYQVHDGSLDVTHTASLVTASYNRFTGRDKLMLIGSSNTVGP
DVGRLRVTLHHNLFDQVLQRLPRVRFGQVDIHNNWYRLGTGFDYAIGVGVQSAVYAENNH
FTLGAGIAAADLLHDWGGTSITARGNWVHAHRSPPGPVDLVAAYNATHDPDLGADAGWTP
TLRTGRPLPAPVVPIVVGALAGADRLPL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattcgcataaccggggcggccctggtcgccctctccctgatcctcgtccccggc
gcggtggtctccgccgcaccggatggaacctccgtcccccgacacgtggagcggttcgcc
cgccagaccctgccggccggcgacggctgggccgccgccgggcccggcaccaccggcggg
tcggccgccaccgccgagcaggtgcatctggtgcgcagccgcgccgacctggtccgcgcg
ctcggcggggacaacgccaccaaccgcaccaacgccacccccaaggtgatcgtggtcgac
ggggtcgtcgacggcttcgagggccccgacggcgacctgctcgactgcgccgacctggcc
gacccggagtactcgctgccggcgtacctggccgcgtacgacccggcggtgtggggcatg
gtgccgccgaccgggccgctggaggccgcccgggtccgctcggtgaccaaccagacgaag
cagacgcagatcaacgtcggcccgaacaccacaatcgtgggcctgcgcggggccacgctg
accggactgaccctgatggtcgacacggccagcaacgtcatcgtccggaacctgaccttc
gacgacgcccgggactgcttcccggcgtggtcgccgacggacggcgcggccggcaactgg
aactcgcagtacgaccagatctcggtgcggcgtagcgagaacgtctggatcgaccacaac
acgttcaccgacggcgacaacccggacagggcccagcccgtccacttcggacgcccctac
caggtgcacgacgggtcgctggacgtcacgcacaccgcgagcctggtcaccgcctcgtac
aaccggttcaccggtcgggacaagctgatgctgatcggctcgtcgaacacggtcggcccg
gacgtcggccggctcagggtgaccctgcaccacaacctcttcgaccaggtgctccagcgg
ctgccccgggtccgcttcggccaggtcgacatccacaacaactggtaccggctcggtacg
ggcttcgactacgcgatcggcgtcggcgtgcagtccgcggtgtacgcggagaacaaccac
ttcaccctcggcgccgggatcgccgccgcggacctgctccacgactggggcggcacctcg
atcacggcccgcggcaactgggtgcacgcccaccggtctccgcccggcccggtcgacctg
gtcgccgcgtacaacgccacccacgaccctgacctgggcgccgacgcgggctggacgccg
acgctgcgtaccggtcggccgttgccggccccggtggtcccgatcgtggtcggcgcgctg
gccggcgcagaccggctgccgctgtag
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