Micromonospora sagamiensis: GCM10017556_57980
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Entry
GCM10017556_57980 CDS
T06946
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msag
Micromonospora sagamiensis
Pathway
msag00040
Pentose and glucuronate interconversions
msag01100
Metabolic pathways
msag02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GCM10017556_57980
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM10017556_57980
Enzymes [BR:
msag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GCM10017556_57980
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
3keto-disac_hyd
Beta_helix
Glyco_hydro_59_C
Laminin_G_3
Motif
Other DBs
NCBI-ProteinID:
BCL18059
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Position
6808429..6810054
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AA seq
541 aa
AA seq
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MNRLPIRGRPAGRLATALAAGALVAGTVLVTTSSAWADTLLTDTFDDGDANGWSRSGGTW
SVVTDGSPAFRQSGTSSDARALVGQSTWTDYGVQARVKPTAFAASTRHVGVIARAQSSSS
YYALVATASGGVQLVKRAGGDPVVLGSATAGVTVGSWSTLRLEAVGSSLRGYVNGALVVQ
ATDAGFAAGRAGLATAYASATFDDVEVATATGAPPTGTPTGGPTPTLPPTEPPIDPGAPP
IGFASVNALGQNGTTGGAGGPTVTVDTAGELLTAIATPGPLTIKVSGMIALPGPMHDVTS
DKTIIGVGATSGITGGGFNIGLPVSNVTTPPADAVHNVIIRNLNFRNTVDDAINVQMFSH
HVWIDHNDLSSGYDGLIDIKRGSSYVTVSWNHTHHHTKNMLLGHDDNNGAQDTGHLRVTY
HHNWYDRTPQRNPRVRFGDPVHVFNNYFVYNTDVGVACQLNSGCLVEGNYFEDVEVPWSI
SYSGSRGRLVARDNVLAGTSEPGDAGGTVTEPRTFYPYQLTDPASVKSVVMAGAGTGKIN
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgacttccgatccggggtcgtccggccggacgcctcgcgacggcgctcgccgcc
ggtgccctggtcgccggcacggtgctggtcaccacctcgtcggcgtgggccgacaccctg
ctcaccgacaccttcgacgacggtgacgccaacggctggtcgcgctcgggcgggacctgg
tcggtggtcaccgacggttcgcccgcgttccggcagtccggcaccagcagcgacgcccgc
gccctggtcggccagtccacctggaccgactacggggtgcaggcccgggtcaagccgacc
gcgttcgccgcctccacccggcacgtcggggtgatcgcgcgggcgcagagcagcagcagt
tactacgccctggtcgccaccgccagcggaggcgtgcaactggtcaagcgcgccggtggc
gacccggtggtgctcggctcggccaccgccggcgtgaccgtgggttcctggtcgacgctg
cggctggaggcggtcggcagctcgctgcgcggctacgtcaacggcgcgctggtggtgcag
gccaccgacgccgggttcgccgccggccgggccggcctggccaccgcgtacgccagcgcc
acgttcgacgacgtggaggtggccaccgccaccggggccccgccgaccggcaccccgacc
ggcgggccgacgccgacgctcccgccgaccgagcccccgatcgacccgggcgcaccgccg
atcggcttcgcctcggtcaacgccctggggcagaacggcaccaccggcggggccggcggc
ccgaccgtcaccgtggacaccgccggtgagctgctcaccgcgatcgccacgcccggaccg
ttgaccatcaaggtcagcgggatgatcgccctgcccggcccgatgcacgacgtcacctcg
gacaagaccatcatcggggtcggcgcgacctcggggatcaccggcggtgggttcaacatc
ggcctaccggtcagcaacgtgaccaccccgccggccgacgccgtgcacaacgtgatcatc
cggaacctgaacttccggaacaccgtcgacgacgcgatcaacgtccagatgttctcccac
cacgtctggatcgaccacaacgacctgtcgagcggctacgacgggctgatcgacatcaag
cgcgggtcgtcgtacgtgaccgtgtcgtggaaccacacccaccaccacaccaagaacatg
ctgctcggccacgacgacaacaacggggcgcaggacaccgggcatctccgggtcacctac
caccacaactggtacgaccggacgccgcagcgcaacccgcgggtacggttcggcgacccg
gtgcacgtgttcaacaactacttcgtctacaacaccgacgtcggggtggcctgccagctc
aactcgggctgcctggtcgaggggaactacttcgaggacgtcgaggtgccctggtcgatc
agctactccggttcccgggggcgactggtcgcccgggacaacgtcctggccggcaccagt
gagccgggggacgccggtggcacggtgaccgagccgcgcaccttctacccgtaccagctc
accgacccggccagcgtgaagtcggtcgtcatggccggcgccggcaccggaaaaatcaac
ttctag
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