Metamycoplasma salivarium: NCTC10113_01108
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Entry
NCTC10113_01108 CDS
T07316
Symbol
holA_2
Name
(GenBank) DNA-directed DNA polymerase
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
msai
Metamycoplasma salivarium
Pathway
msai03030
DNA replication
msai03430
Mismatch repair
msai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10113_01108 (holA_2)
03430 Mismatch repair
NCTC10113_01108 (holA_2)
03440 Homologous recombination
NCTC10113_01108 (holA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msai03032
]
NCTC10113_01108 (holA_2)
03400 DNA repair and recombination proteins [BR:
msai03400
]
NCTC10113_01108 (holA_2)
Enzymes [BR:
msai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10113_01108 (holA_2)
DNA replication proteins [BR:
msai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10113_01108 (holA_2)
DNA repair and recombination proteins [BR:
msai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10113_01108 (holA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Rep_fac_C
pXO2-34
Get5_C
Motif
Other DBs
NCBI-ProteinID:
CAD7361016
LinkDB
All DBs
Position
1:complement(179359..180321)
Genome browser
AA seq
320 aa
AA seq
DB search
MYLIKGDENYFIEQKTREIVQNFALQNNHEIRVINYSIDIDIEKFVSEIFDVDIFSPKKI
IVLQNIDFLNAKSKIKPTLLDEIIHILETKNDDIEIVFTQYIAKYDKTFTPSKVFNFLLN
NAVVIDCKKLSDRALTQFVAKMIEQKGGKTDVWTVTTLLLSLPNDLQIINNEIDRLMLLN
KNITIQMIQNNTLNIGSNIDFAFSNAFIDYSSISEIIAKLQEQLNYGISASQIISQMTNI
LYDAQWLYFLKNKYSSDAEINKILNMNEYKLKLTRSFLEKIGYSKIKKLTIKLAKLDKDI
KLGYVDEIIGIETFMLNLFQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtatctaataaaaggtgatgaaaattattttatcgagcaaaaaaccagagaaattgtg
caaaattttgctctgcaaaataatcatgaaattagggttataaattacagcatagatatt
gacattgaaaaatttgtgagcgaaatttttgatgttgatatttttagtcctaaaaaaata
attgtgttacaaaatattgactttttaaatgcaaaaagtaagattaaacctactttatta
gacgaaattattcatattttagaaactaaaaatgatgatattgaaatagtgtttactcaa
tatattgcaaaatatgataaaacattcacaccttcaaaagtttttaattttttattaaat
aatgcagttgttatagattgtaaaaaactttctgaccgggcattaacacaatttgttgcg
aaaatgattgaacaaaaaggtggaaaaactgatgtttgaacagtaacaactttgctttta
tctttaccaaatgacttacaaattattaataatgaaattgatagactaatgttgttaaat
aagaacattactattcaaatgattcaaaataacacattaaatattggttctaatattgac
tttgcgttttcaaatgcttttattgactattcaagcattagcgaaattattgctaagtta
caggaacaattaaattatggaattagtgcaagtcaaatcataagccaaatgacaaacatt
ttgtatgatgcccaatggttatattttttgaaaaataaatatagcagtgatgctgagatt
aataagattttgaatatgaatgaatataaactaaaactgacaagaagttttttagaaaaa
ataggttatagtaaaataaaaaaattaactattaaattagcaaaattagataaagatatt
aagctaggatatgttgatgaaatcattggaattgaaacttttatgttaaatttatttcaa
taa
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